MGC_2016_unknown_strain
PSP 10012
DNA Source: Medicinal Genomics
General Information
- Accession Date
- May 31, 2021
- Report Type
- Whole-Genome Sequencing
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 352
- No. of Contigs (>= 50K bp)
- 133
- Total Length (>= 25K bp)
- 19,513,131
- Total Length (>= 50K bp)
- 11,990,056
- Total Contigs
- 11,084
- Largest Contig
- 267,799
- Total Length
- 47,872,143
- GC (%)
- 46.12
- N50
- 16,304
Variants
PsiR
1 variant
—
1 MODERATE
PsiR
MODERATE
p.Ala344Val
c.1031C>T
missense variant
G/A
CM039007.1:1655743
PsiT1
18 variants
—
1 HIGH 17 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Thr246Ile
c.737C>T
missense variant
C/T
CM039007.1:1664333
PsiT1
MODERATE
p.Arg266Ser
c.798A>T
missense variant
A/T
CM039007.1:1664394
PsiT1
MODERATE
p.Leu268Ile
c.802C>A
missense variant
C/A
CM039007.1:1664398
PsiT1
MODERATE
p.Thr386Ala
c.1156A>G
missense variant
A/G
CM039007.1:1664803
PsiT1
MODERATE
p.Ile505Val
c.1513A>G
missense variant
A/G
CM039007.1:1665277
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Met542Ile
c.1626G>A
missense variant
G/A
CM039007.1:1665570
PsiT1
MODERATE
p.Ile563Leu
c.1687A>C
missense variant
A/C
CM039007.1:1665631
PsiT1
MODERATE
p.Val564Ile
c.1690G>A
missense variant
G/A
CM039007.1:1665634
PsiT1
MODERATE
p.Asn572Asp
c.1714A>G
missense variant
A/G
CM039007.1:1665658
PsiT1
HIGH
c.1720+1G>T
c.1720+1G>T
splice donor variant & intron variant
G/T
CM039007.1:1665665
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Ser680Ala
c.2038T>G
missense variant
T/G
CM039007.1:1666406
PsiT1
MODERATE
p.Val709Ala
c.2126T>C
missense variant
T/C
CM039007.1:1666494
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Treasure-Coast-2-Mush (PSP10082) — 0.281
- Treasure-coast-1-PS (PSP10054) — 0.282
- Treasure-coast-2-PS (PSP10055) — 0.282
- Treasure-coast-3-PS (PSP10056) — 0.282
- Orissa-India-4-Mush (PSP10073) — 0.301
- Z-strain-1-Mush (PSP10083) — 0.314
- Golden-Teacher_Denver (PSP10011) — 0.319
- Luminous-lucies-2-PS (PSP10032) — 0.321
- Luminous-lucies-1-PS (PSP10034) — 0.321
- Luminous-lucies-3-PS (PSP10033) — 0.321
- Arenal-Volcano-1-Mush (PSP10059) — 0.322
- Roatan-Honduras-4-Mush (PSP10079) — 0.323
- Orissa-India-1-Mush (PSP10072) — 0.331
- Penvy-2-SW (PSP10075) — 0.332
- Penvy-Col5-PS (PSP10044) — 0.332
- Penvy-Col4-PS (PSP10043) — 0.332
- Penvy-1-PS (PSP10045) — 0.332
- Costa-Rica-3-redo-SW (PSP10024) — 0.339
- Chitwan-1-SW (PSP10002) — 0.340
- Bplus-ITW-WM (PSP10129) — 0.349
Most Distant
- Orissa-India-print-ITW (PSP10074) — 0.578
- Bplus-3-PS (PSP10001) — 0.577
- Bplus (PSP10088) — 0.577
- HUA-Early (PSP10092) — 0.576
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.575
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.574
- Orissa-India-ITW (PSP10071) — 0.574
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.574
- Avery-Albino-ITW-WM (PSP10123) — 0.573
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.571
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.571
- McKennaii-1-PS (PSP10069) — 0.571
- Gulf-Coast (PSP10091) — 0.570
- Gulf-Coast-BAF (PSP10090) — 0.570
- Burma-1-SW (PSP10020) — 0.569
- Cambodian--1-PS (PSP10060) — 0.567
- Golden-Teacher (PSP10089) — 0.567
- GoldenCoast-UM (PSP10109) — 0.566
- GoldenTeacher-3-SW (PSP10029) — 0.565
- Ecuador-3-SW (PSP10025) — 0.565
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
6ba44194cc0da4a2
ba77b3ef5ba3d6bb 6ae37859cd3b4d11 4e11ff6258bf7461 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
3f5b833b0002012e642ba600168c77db 59e2b2dbf1f2f938 8c076f04cfdd6c9f