McKennaii-1-PS
PSP 10069
DNA Source: Premium Spores
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 424
- No. of Contigs (>= 50K bp)
- 222
- Total Length (>= 25K bp)
- 30,197,072
- Total Length (>= 50K bp)
- 23,007,370
- Total Contigs
- 2,769
- Largest Contig
- 457,012
- Total Length
- 40,175,286
- GC (%)
- 46.09
- N50
- 62,077
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.668C>G | p.Ser223* | stop gained | high | CM039007.1 | 1664264 | C/G |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.1864A>G | p.Lys622Glu | missense variant | moderate | CM039007.1 | 1666169 | A/G |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.022 Orissa-India-ITW (PSP10071)
- 0.027 Bplus-3-PS (PSP10001)
- 0.030 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.032 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.036 Bplus (PSP10088)
- 0.041 HUA-Early (PSP10092)
- 0.043 Golden-Teacher (PSP10089)
- 0.047 Bplus-2-redo-SW (PSP10015)
- 0.049 Bplus-1-redo-SW (PSP10014)
- 0.049 Bplus-3-redo-SW (PSP10016)
- 0.049 GoldenTeacher-3-SW (PSP10029)
- 0.050 Huautla-3-PS (PSP10005)
- 0.050 Maui-2-PS (PSP10041)
- 0.050 Z-strain-3-PS (PSP10084)
- 0.050 Ecuador-3-PS (PSP10061)
- 0.052 Maui-3-PS (PSP10042)
- 0.052 Ecuador-3-SW (PSP10025)
- 0.053 Maui-1-PS (PSP10040)
- 0.053 Huautla-3-redo-SW (PSP10031)
- 0.057 Puerto-Rican-ITW (PSP10078)
Most genetically distant strains (All Samples)
- 0.717 Penvy-1-PS (PSP10045)
- 0.717 Penvy-Col5-PS (PSP10044)
- 0.717 Penvy-Col4-PS (PSP10043)
- 0.716 Penvy-2-SW (PSP10075)
- 0.661 Costa-Rica-1-redo-SW (PSP10022)
- 0.659 Costa-Rica-2-redo-SW (PSP10023)
- 0.656 Treasure-coast-1-PS (PSP10054)
- 0.656 Treasure-coast-3-PS (PSP10056)
- 0.656 Treasure-coast-2-PS (PSP10055)
- 0.653 Treasure-Coast-2-Mush (PSP10082)
- 0.630 Costa-Rica-3-redo-SW (PSP10024)
- 0.619 Bplus-ITW-WM (PSP10129)
- 0.610 Arenal-Volcano-1-Mush (PSP10059)
- 0.607 Luminous-lucies-2-PS (PSP10032)
- 0.606 Luminous-lucies-3-PS (PSP10033)
- 0.606 Luminous-lucies-1-PS (PSP10034)
- 0.606 Orissa-India-1-Mush (PSP10072)
- 0.605 Orissa-India-4-Mush (PSP10073)
- 0.605 Roatan-Honduras-4-Mush (PSP10079)
- 0.603 ColumbiaRust-1-SW (PSP10021)
Blockchain Registration Information
- Transaction ID
-
c502e5464eb50aa3
6738056e2de0cc5e ba9d724fb5fd07ee 8e6f1ef6a8463b65 - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
29781d5756204817
e120077bc1d2525c 79581c5d1cc9b672 93cbe7f4c3f8bb08