Orissa-India-1-Mush
PSP 10072
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 525
- No. of Contigs (>= 50K bp)
- 167
- Total Length (>= 25K bp)
- 25,356,801
- Total Length (>= 50K bp)
- 13,125,098
- Total Contigs
- 40,201
- Largest Contig
- 221,724
- Total Length
- 102,516,680
- GC (%)
- 46.02
- N50
- 6,552
Variants
PsiT1
4 variants
—
4 MODERATE
PsiT1
MODERATE
p.Lys166Gln
c.496A>C
missense variant
A/C
CM039007.1:1663979
PsiT1
MODERATE
p.Ala292Ser
c.874G>T
missense variant
G/T
CM039007.1:1664470
PsiT1
MODERATE
p.Leu568Met
c.1702C>A
missense variant
C/A
CM039007.1:1665646
PsiT1
MODERATE
p.Glu746Gly
c.2237A>G
missense variant
A/G
CM039007.1:1666605
PsiH
9 variants
—
9 MODERATE
PsiH
MODERATE
p.Asp121Glu
c.363C>A
missense variant
C/A
CM039007.1:1667977
PsiH
MODERATE
p.Arg127Gly
c.379A>G
missense variant
A/G
CM039007.1:1667993
PsiH
MODERATE
p.Ser135Thr
c.404G>C
missense variant
G/C
CM039007.1:1668018
PsiH
MODERATE
p.Gly138Ser
c.412G>A
missense variant
G/A
CM039007.1:1668026
PsiH
MODERATE
p.Gly138Asp
c.413G>A
missense variant
G/A
CM039007.1:1668027
PsiH
MODERATE
p.Lys140Arg
c.419A>G
missense variant
A/G
CM039007.1:1668033
PsiH
MODERATE
p.His151Asn
c.451C>A
missense variant
C/A
CM039007.1:1668065
PsiH
MODERATE
p.Asp404Asn
c.1210G>A
missense variant
G/A
CM039007.1:1669172
PsiH
MODERATE
p.Val407Glu
c.1220T>A
missense variant
T/A
CM039007.1:1669182
PsiM
1 variant
—
1 HIGH
PsiM
HIGH
p.Cys119*
c.357T>A
stop gained
A/T
CM039007.1:1674466
PsiD
5 variants
—
5 MODERATE
PsiD
MODERATE
p.Ile310Val
c.928A>G
missense variant
T/C
CM039007.1:1676574
PsiD
MODERATE
p.Val307Leu
c.919G>C
missense variant
C/G
CM039007.1:1676583
PsiD
MODERATE
p.Leu286Ile
c.856C>A
missense variant
G/T
CM039007.1:1676646
PsiD
MODERATE
p.Asn208Thr
c.623A>C
missense variant
T/G
CM039007.1:1676879
PsiD
MODERATE
p.Gln93His
c.279G>C
missense variant
C/G
CM039007.1:1677223
Genetic Relatives
Nearest
- Orissa-India-4-Mush (PSP10073) — 0.094
- Penvy-1-PS (PSP10045) — 0.173
- Penvy-2-SW (PSP10075) — 0.173
- Penvy-Col5-PS (PSP10044) — 0.173
- Penvy-Col4-PS (PSP10043) — 0.173
- MGC_2016_unknown_strain (PSP10012) — 0.331
- Z-strain-1-Mush (PSP10083) — 0.333
- Costa-Rica-1-redo-SW (PSP10022) — 0.338
- Costa-Rica-2-redo-SW (PSP10023) — 0.341
- Costa-Rica-3-redo-SW (PSP10024) — 0.348
- Bplus-ITW-WM (PSP10129) — 0.349
- Roatan-Honduras-4-Mush (PSP10079) — 0.354
- ColumbiaRust-1-SW (PSP10021) — 0.355
- Treasure-Coast-2-Mush (PSP10082) — 0.358
- Treasure-coast-3-PS (PSP10056) — 0.360
- Treasure-coast-1-PS (PSP10054) — 0.360
- Treasure-coast-2-PS (PSP10055) — 0.361
- Arenal-Volcano-1-Mush (PSP10059) — 0.361
- Tosohatchee-print-ITW (PSP10081) — 0.364
- Luminous-lucies-2-PS (PSP10032) — 0.366
Most Distant
- Bplus-3-PS (PSP10001) — 0.617
- Huautla-3-redo-SW (PSP10031) — 0.616
- Huautla-2-redo-SW (PSP10030) — 0.616
- Huautla-3-PS (PSP10005) — 0.616
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.614
- Puerto-Rican-ITW (PSP10078) — 0.614
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.614
- Maui-2-PS (PSP10041) — 0.613
- Bplus-2-redo-SW (PSP10015) — 0.612
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.612
- Maui-1-PS (PSP10040) — 0.612
- Bplus-1-redo-SW (PSP10014) — 0.611
- Bplus-3-redo-SW (PSP10016) — 0.611
- Maui-3-PS (PSP10042) — 0.611
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.611
- GoldenTeacher-3-SW (PSP10029) — 0.610
- Orissa-India-ITW (PSP10071) — 0.610
- Ecuador-3-SW (PSP10025) — 0.610
- Gulf-Coast-BAF (PSP10090) — 0.610
- Gulf-Coast (PSP10091) — 0.610
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
387bbc683294cb9a
af7cd1ef23a53bff 6d38077d547c9339 102e26d05553548d - Stamping Certificate
- Download PDF (39.5 KB)
- SHASUM Hash
-
315a6829d505f3299eafe04ae4b86e76 c85f7b20540cd6fb 1847100365f37873