Orissa-India-1-Mush
PSP 10072
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 525
- No. of Contigs (>= 50K bp)
- 167
- Total Length (>= 25K bp)
- 25,356,801
- Total Length (>= 50K bp)
- 13,125,098
- Total Contigs
- 40,201
- Largest Contig
- 221,724
- Total Length
- 102,516,680
- GC (%)
- 46.02
- N50
- 6,552
Variants
PsiT1
4 variants
—
4 MODERATE
PsiT1
MODERATE
p.Lys166Gln
c.496A>C
missense variant
A/C
CM039007.1:1663979
PsiT1
MODERATE
p.Ala292Ser
c.874G>T
missense variant
G/T
CM039007.1:1664470
PsiT1
MODERATE
p.Leu568Met
c.1702C>A
missense variant
C/A
CM039007.1:1665646
PsiT1
MODERATE
p.Glu746Gly
c.2237A>G
missense variant
A/G
CM039007.1:1666605
PsiH
9 variants
—
9 MODERATE
PsiH
MODERATE
p.Asp121Glu
c.363C>A
missense variant
C/A
CM039007.1:1667977
PsiH
MODERATE
p.Arg127Gly
c.379A>G
missense variant
A/G
CM039007.1:1667993
PsiH
MODERATE
p.Ser135Thr
c.404G>C
missense variant
G/C
CM039007.1:1668018
PsiH
MODERATE
p.Gly138Ser
c.412G>A
missense variant
G/A
CM039007.1:1668026
PsiH
MODERATE
p.Gly138Asp
c.413G>A
missense variant
G/A
CM039007.1:1668027
PsiH
MODERATE
p.Lys140Arg
c.419A>G
missense variant
A/G
CM039007.1:1668033
PsiH
MODERATE
p.His151Asn
c.451C>A
missense variant
C/A
CM039007.1:1668065
PsiH
MODERATE
p.Asp404Asn
c.1210G>A
missense variant
G/A
CM039007.1:1669172
PsiH
MODERATE
p.Val407Glu
c.1220T>A
missense variant
T/A
CM039007.1:1669182
PsiM
1 variant
—
1 HIGH
PsiM
HIGH
p.Cys119*
c.357T>A
stop gained
A/T
CM039007.1:1674466
PsiD
5 variants
—
5 MODERATE
PsiD
MODERATE
p.Ile310Val
c.928A>G
missense variant
T/C
CM039007.1:1676574
PsiD
MODERATE
p.Val307Leu
c.919G>C
missense variant
C/G
CM039007.1:1676583
PsiD
MODERATE
p.Leu286Ile
c.856C>A
missense variant
G/T
CM039007.1:1676646
PsiD
MODERATE
p.Asn208Thr
c.623A>C
missense variant
T/G
CM039007.1:1676879
PsiD
MODERATE
p.Gln93His
c.279G>C
missense variant
C/G
CM039007.1:1677223
Genetic Relatives
Nearest
- Orissa-India-4-Mush (PSP10073) — 0.094
- Penvy-1-PS (PSP10045) — 0.173
- Penvy-2-SW (PSP10075) — 0.173
- Penvy-Col5-PS (PSP10044) — 0.173
- Penvy-Col4-PS (PSP10043) — 0.173
- MGC_2016_unknown_strain (PSP10012) — 0.331
- Z-strain-1-Mush (PSP10083) — 0.333
- Costa-Rica-1-redo-SW (PSP10022) — 0.338
- Costa-Rica-2-redo-SW (PSP10023) — 0.341
- Costa-Rica-3-redo-SW (PSP10024) — 0.348
- Bplus-ITW-WM (PSP10129) — 0.349
- Roatan-Honduras-4-Mush (PSP10079) — 0.354
- ColumbiaRust-1-SW (PSP10021) — 0.355
- Treasure-Coast-2-Mush (PSP10082) — 0.358
- Treasure-coast-3-PS (PSP10056) — 0.360
- Treasure-coast-1-PS (PSP10054) — 0.360
- Treasure-coast-2-PS (PSP10055) — 0.361
- Arenal-Volcano-1-Mush (PSP10059) — 0.361
- Tosohatchee-print-ITW (PSP10081) — 0.364
- Luminous-lucies-2-PS (PSP10032) — 0.366
Most Distant
- Bplus-3-PS (PSP10001) — 0.617
- Huautla-3-redo-SW (PSP10031) — 0.616
- Huautla-2-redo-SW (PSP10030) — 0.616
- Huautla-3-PS (PSP10005) — 0.616
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.614
- Puerto-Rican-ITW (PSP10078) — 0.614
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.614
- Maui-2-PS (PSP10041) — 0.613
- Bplus-2-redo-SW (PSP10015) — 0.612
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.612
- Maui-1-PS (PSP10040) — 0.612
- Bplus-1-redo-SW (PSP10014) — 0.611
- Bplus-3-redo-SW (PSP10016) — 0.611
- Maui-3-PS (PSP10042) — 0.611
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.611
- GoldenTeacher-3-SW (PSP10029) — 0.610
- Orissa-India-ITW (PSP10071) — 0.610
- Ecuador-3-SW (PSP10025) — 0.610
- Gulf-Coast-BAF (PSP10090) — 0.610
- Gulf-Coast (PSP10091) — 0.610
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
387bbc683294cb9a
af7cd1ef23a53bff 6d38077d547c9339 102e26d05553548d - Stamping Certificate
- Download PDF (39.5 KB)
- SHASUM Hash
-
315a6829d505f3299eafe04ae4b86e76 c85f7b20540cd6fb 1847100365f37873