Arenal-Volcano-1-Mush
PSP 10059
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 411
- No. of Contigs (>= 50K bp)
- 186
- Total Length (>= 25K bp)
- 27,880,081
- Total Length (>= 50K bp)
- 19,971,400
- Total Contigs
- 5,606
- Largest Contig
- 527,182
- Total Length
- 43,252,179
- GC (%)
- 46.03
- N50
- 44,205
Variants
PsiR
1 variant
—
1 MODERATE
PsiR
MODERATE
p.Ala344Val
c.1031C>T
missense variant
G/A
CM039007.1:1655743
PsiT1
17 variants
—
2 HIGH 15 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
HIGH
p.Ser223*
c.668C>G
stop gained
C/G
CM039007.1:1664264
PsiT1
MODERATE
p.Thr246Ile
c.737C>T
missense variant
C/T
CM039007.1:1664333
PsiT1
MODERATE
p.Arg266Ser
c.798A>T
missense variant
A/T
CM039007.1:1664394
PsiT1
MODERATE
p.Leu268Ile
c.802C>A
missense variant
C/A
CM039007.1:1664398
PsiT1
MODERATE
p.Thr386Ala
c.1156A>G
missense variant
A/G
CM039007.1:1664803
PsiT1
MODERATE
p.Ile505Val
c.1513A>G
missense variant
A/G
CM039007.1:1665277
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Met542Ile
c.1626G>A
missense variant
G/A
CM039007.1:1665570
PsiT1
MODERATE
p.Asn572Asp
c.1714A>G
missense variant
A/G
CM039007.1:1665658
PsiT1
HIGH
c.1720+1G>T
c.1720+1G>T
splice donor variant & intron variant
G/T
CM039007.1:1665665
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Ser680Ala
c.2038T>G
missense variant
T/G
CM039007.1:1666406
PsiT1
MODERATE
p.Val709Ala
c.2126T>C
missense variant
T/C
CM039007.1:1666494
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiM
2 variants
—
2 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiM
MODERATE
p.Glu43Asp
c.129A>T
missense variant
T/A
CM039007.1:1674903
PsiD
1 variant
—
1 MODERATE
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Luminous-lucies-2-PS (PSP10032) — 0.021
- Luminous-lucies-3-PS (PSP10033) — 0.022
- Luminous-lucies-1-PS (PSP10034) — 0.022
- Roatan-Honduras-4-Mush (PSP10079) — 0.295
- Treasure-Coast-2-Mush (PSP10082) — 0.311
- Treasure-coast-3-PS (PSP10056) — 0.312
- Treasure-coast-1-PS (PSP10054) — 0.312
- Treasure-coast-2-PS (PSP10055) — 0.312
- Costa-Rica-3-redo-SW (PSP10024) — 0.314
- ColumbiaRust-1-SW (PSP10021) — 0.315
- Bplus-ITW-WM (PSP10129) — 0.319
- MGC_2016_unknown_strain (PSP10012) — 0.322
- Penvy-2-SW (PSP10075) — 0.328
- Penvy-Col5-PS (PSP10044) — 0.328
- Penvy-1-PS (PSP10045) — 0.328
- Penvy-Col4-PS (PSP10043) — 0.328
- Tosohatchee-print-ITW (PSP10081) — 0.330
- Chitwan-1-SW (PSP10002) — 0.330
- Z-strain-1-Mush (PSP10083) — 0.331
- Costa-Rica-1-redo-SW (PSP10022) — 0.332
Most Distant
- Bplus-3-PS (PSP10001) — 0.618
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.616
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.615
- Orissa-India-ITW (PSP10071) — 0.614
- Puerto-Rican-ITW (PSP10078) — 0.612
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.612
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.612
- Bplus (PSP10088) — 0.612
- Bplus-3-redo-SW (PSP10016) — 0.611
- HUA-Early (PSP10092) — 0.610
- McKennaii-1-PS (PSP10069) — 0.610
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.610
- Bplus-1-redo-SW (PSP10014) — 0.610
- Bplus-2-redo-SW (PSP10015) — 0.610
- Gulf-Coast-BAF (PSP10090) — 0.610
- Gulf-Coast (PSP10091) — 0.609
- Huautla-2-redo-SW (PSP10030) — 0.608
- Ecuador-3-SW (PSP10025) — 0.608
- GoldenTeacher-3-SW (PSP10029) — 0.607
- Maui-2-PS (PSP10041) — 0.607
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
9ff9984be1830085
703f7a5b75898e0d eba84fc3d9df6dd1 0bfcf95f24b662af - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
80d0764d2fce8c19de6a0e9a510efd7e 32ee265018d34825 ee0e1db72aca2d49