Arenal-Volcano-1-Mush
PSP 10059
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 411
- No. of Contigs (>= 50K bp)
- 186
- Total Length (>= 25K bp)
- 27,880,081
- Total Length (>= 50K bp)
- 19,971,400
- Total Contigs
- 5,606
- Largest Contig
- 527,182
- Total Length
- 43,252,179
- GC (%)
- 46.03
- N50
- 44,205
Variants
PsiR
1 variant
—
1 MODERATE
PsiR
MODERATE
p.Ala344Val
c.1031C>T
missense variant
G/A
CM039007.1:1655743
PsiT1
17 variants
—
2 HIGH 15 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
HIGH
p.Ser223*
c.668C>G
stop gained
C/G
CM039007.1:1664264
PsiT1
MODERATE
p.Thr246Ile
c.737C>T
missense variant
C/T
CM039007.1:1664333
PsiT1
MODERATE
p.Arg266Ser
c.798A>T
missense variant
A/T
CM039007.1:1664394
PsiT1
MODERATE
p.Leu268Ile
c.802C>A
missense variant
C/A
CM039007.1:1664398
PsiT1
MODERATE
p.Thr386Ala
c.1156A>G
missense variant
A/G
CM039007.1:1664803
PsiT1
MODERATE
p.Ile505Val
c.1513A>G
missense variant
A/G
CM039007.1:1665277
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Met542Ile
c.1626G>A
missense variant
G/A
CM039007.1:1665570
PsiT1
MODERATE
p.Asn572Asp
c.1714A>G
missense variant
A/G
CM039007.1:1665658
PsiT1
HIGH
c.1720+1G>T
c.1720+1G>T
splice donor variant & intron variant
G/T
CM039007.1:1665665
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Ser680Ala
c.2038T>G
missense variant
T/G
CM039007.1:1666406
PsiT1
MODERATE
p.Val709Ala
c.2126T>C
missense variant
T/C
CM039007.1:1666494
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiM
2 variants
—
2 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiM
MODERATE
p.Glu43Asp
c.129A>T
missense variant
T/A
CM039007.1:1674903
PsiD
1 variant
—
1 MODERATE
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Luminous-lucies-2-PS (PSP10032) — 0.021
- Luminous-lucies-3-PS (PSP10033) — 0.022
- Luminous-lucies-1-PS (PSP10034) — 0.022
- Roatan-Honduras-4-Mush (PSP10079) — 0.295
- Treasure-Coast-2-Mush (PSP10082) — 0.311
- Treasure-coast-3-PS (PSP10056) — 0.312
- Treasure-coast-1-PS (PSP10054) — 0.312
- Treasure-coast-2-PS (PSP10055) — 0.312
- Costa-Rica-3-redo-SW (PSP10024) — 0.314
- ColumbiaRust-1-SW (PSP10021) — 0.315
- Bplus-ITW-WM (PSP10129) — 0.319
- MGC_2016_unknown_strain (PSP10012) — 0.322
- Penvy-2-SW (PSP10075) — 0.328
- Penvy-Col5-PS (PSP10044) — 0.328
- Penvy-1-PS (PSP10045) — 0.328
- Penvy-Col4-PS (PSP10043) — 0.328
- Tosohatchee-print-ITW (PSP10081) — 0.330
- Chitwan-1-SW (PSP10002) — 0.330
- Z-strain-1-Mush (PSP10083) — 0.331
- Costa-Rica-1-redo-SW (PSP10022) — 0.332
Most Distant
- Bplus-3-PS (PSP10001) — 0.618
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.616
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.615
- Orissa-India-ITW (PSP10071) — 0.614
- Puerto-Rican-ITW (PSP10078) — 0.612
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.612
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.612
- Bplus (PSP10088) — 0.612
- Bplus-3-redo-SW (PSP10016) — 0.611
- HUA-Early (PSP10092) — 0.610
- McKennaii-1-PS (PSP10069) — 0.610
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.610
- Bplus-1-redo-SW (PSP10014) — 0.610
- Bplus-2-redo-SW (PSP10015) — 0.610
- Gulf-Coast-BAF (PSP10090) — 0.610
- Gulf-Coast (PSP10091) — 0.609
- Huautla-2-redo-SW (PSP10030) — 0.608
- Ecuador-3-SW (PSP10025) — 0.608
- GoldenTeacher-3-SW (PSP10029) — 0.607
- Maui-2-PS (PSP10041) — 0.607
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
9ff9984be1830085
703f7a5b75898e0d eba84fc3d9df6dd1 0bfcf95f24b662af - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
80d0764d2fce8c19de6a0e9a510efd7e 32ee265018d34825 ee0e1db72aca2d49