Cambodian--1-PS
PSP 10060
DNA Source: Premium Spores
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 416
- No. of Contigs (>= 50K bp)
- 210
- Total Length (>= 25K bp)
- 29,811,682
- Total Length (>= 50K bp)
- 22,485,690
- Total Contigs
- 2,704
- Largest Contig
- 552,232
- Total Length
- 40,141,083
- GC (%)
- 46.09
- N50
- 61,801
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.729G>A | p.Trp243* | stop gained | high | CM039007.1 | 1673826 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.040 Burma-1-SW (PSP10020)
- 0.057 True-Albino-Teacher-ITW-WM (PSP10140)
- 0.066 Bplus (PSP10088)
- 0.067 Avery-Albino-ITW-WM (PSP10123)
- 0.069 Orissa-India-ITW (PSP10071)
- 0.070 Bplus-2-redo-SW (PSP10015)
- 0.070 Puerto-Rican-ITW (PSP10078)
- 0.070 McKennaii-1-PS (PSP10069)
- 0.070 Bplus-3-redo-SW (PSP10016)
- 0.070 Bplus-1-redo-SW (PSP10014)
- 0.070 HUA-Early (PSP10092)
- 0.071 Huautla-3-PS (PSP10005)
- 0.073 Bplus-3-PS (PSP10001)
- 0.073 Maui-2-PS (PSP10041)
- 0.075 Huautla-3-redo-SW (PSP10031)
- 0.075 Maui-3-PS (PSP10042)
- 0.075 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.075 Maui-1-PS (PSP10040)
- 0.076 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.077 Huautla-2-redo-SW (PSP10030)
Most genetically distant strains (All Samples)
- 0.700 Penvy-1-PS (PSP10045)
- 0.700 Penvy-Col4-PS (PSP10043)
- 0.700 Penvy-Col5-PS (PSP10044)
- 0.699 Penvy-2-SW (PSP10075)
- 0.648 Costa-Rica-1-redo-SW (PSP10022)
- 0.646 Costa-Rica-2-redo-SW (PSP10023)
- 0.641 Treasure-coast-1-PS (PSP10054)
- 0.641 Treasure-coast-2-PS (PSP10055)
- 0.641 Treasure-coast-3-PS (PSP10056)
- 0.639 Treasure-Coast-2-Mush (PSP10082)
- 0.618 Costa-Rica-3-redo-SW (PSP10024)
- 0.607 Bplus-ITW-WM (PSP10129)
- 0.605 ColumbiaRust-1-SW (PSP10021)
- 0.601 Orissa-India-1-Mush (PSP10072)
- 0.601 Arenal-Volcano-1-Mush (PSP10059)
- 0.600 Orissa-India-4-Mush (PSP10073)
- 0.598 Luminous-lucies-2-PS (PSP10032)
- 0.598 Luminous-lucies-3-PS (PSP10033)
- 0.598 Luminous-lucies-1-PS (PSP10034)
- 0.597 Roatan-Honduras-4-Mush (PSP10079)
Blockchain Registration Information
- Transaction ID
-
bfe63a8fadf47359
fb7eeccf321245c2 47bb20dbf1736bd6 ab195636a862473e - Stamping Certificate
- Download PDF (39.5 KB)
- SHASUM Hash
-
b9b3a33c84538bbe
4364b3da7571d2b5 27fa309ba7cc12de 84ba2ac65c696bf6