Cambodian--1-PS
PSP 10060
DNA Source: Premium Spores
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 416
- No. of Contigs (>= 50K bp)
- 210
- Total Length (>= 25K bp)
- 29,811,682
- Total Length (>= 50K bp)
- 22,485,690
- Total Contigs
- 2,704
- Largest Contig
- 552,232
- Total Length
- 40,141,083
- GC (%)
- 46.09
- N50
- 61,801
Variants
PsiT1
5 variants
—
5 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
2 variants
—
1 HIGH 1 MODERATE
PsiM
HIGH
p.Trp243*
c.729G>A
stop gained
C/T
CM039007.1:1673826
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Burma-1-SW (PSP10020) — 0.040
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.057
- Bplus (PSP10088) — 0.066
- Avery-Albino-ITW-WM (PSP10123) — 0.067
- Orissa-India-ITW (PSP10071) — 0.069
- Bplus-2-redo-SW (PSP10015) — 0.070
- Puerto-Rican-ITW (PSP10078) — 0.070
- McKennaii-1-PS (PSP10069) — 0.070
- Bplus-3-redo-SW (PSP10016) — 0.070
- Bplus-1-redo-SW (PSP10014) — 0.070
- HUA-Early (PSP10092) — 0.070
- Huautla-3-PS (PSP10005) — 0.071
- Bplus-3-PS (PSP10001) — 0.073
- Maui-2-PS (PSP10041) — 0.073
- Huautla-3-redo-SW (PSP10031) — 0.075
- Maui-3-PS (PSP10042) — 0.075
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.075
- Maui-1-PS (PSP10040) — 0.075
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.076
- Huautla-2-redo-SW (PSP10030) — 0.077
Most Distant
- Penvy-1-PS (PSP10045) — 0.700
- Penvy-Col4-PS (PSP10043) — 0.700
- Penvy-Col5-PS (PSP10044) — 0.700
- Penvy-2-SW (PSP10075) — 0.699
- Costa-Rica-1-redo-SW (PSP10022) — 0.648
- Costa-Rica-2-redo-SW (PSP10023) — 0.646
- Treasure-coast-1-PS (PSP10054) — 0.641
- Treasure-coast-2-PS (PSP10055) — 0.641
- Treasure-coast-3-PS (PSP10056) — 0.641
- Treasure-Coast-2-Mush (PSP10082) — 0.639
- Costa-Rica-3-redo-SW (PSP10024) — 0.618
- Bplus-ITW-WM (PSP10129) — 0.607
- ColumbiaRust-1-SW (PSP10021) — 0.605
- Orissa-India-1-Mush (PSP10072) — 0.601
- Arenal-Volcano-1-Mush (PSP10059) — 0.601
- Orissa-India-4-Mush (PSP10073) — 0.600
- Luminous-lucies-2-PS (PSP10032) — 0.598
- Luminous-lucies-3-PS (PSP10033) — 0.598
- Luminous-lucies-1-PS (PSP10034) — 0.598
- Roatan-Honduras-4-Mush (PSP10079) — 0.597
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
bfe63a8fadf47359
fb7eeccf321245c2 47bb20dbf1736bd6 ab195636a862473e - Stamping Certificate
- Download PDF (39.5 KB)
- SHASUM Hash
-
b9b3a33c84538bbe4364b3da7571d2b5 27fa309ba7cc12de 84ba2ac65c696bf6