Advanced Strain Search

GoldenTeacher-3-SW

PSP 10029

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
408
No. of Contigs (>= 50K bp)
213
Total Length (>= 25K bp)
30,168,946
Total Length (>= 50K bp)
23,164,691
Total Contigs
2,567
Largest Contig
475,568
Total Length
40,013,945
GC (%)
46.14
N50
64,667

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Maui-2-PS (PSP10041) — 0.026
  2. Ecuador-3-SW (PSP10025) — 0.026
  3. Maui-1-PS (PSP10040) — 0.029
  4. Maui-3-PS (PSP10042) — 0.029
  5. Ecuador-3-PS (PSP10061) — 0.030
  6. Golden-Teacher (PSP10089) — 0.031
  7. GoldenTeacher-2-SW (PSP10028) — 0.031
  8. GoldenTeacher-1-SW (PSP10027) — 0.033
  9. Bplus-2-redo-SW (PSP10015) — 0.034
  10. Huautla-3-PS (PSP10005) — 0.034
  11. Bplus-1-redo-SW (PSP10014) — 0.035
  12. Bplus-3-redo-SW (PSP10016) — 0.036
  13. Huautla-3-redo-SW (PSP10031) — 0.036
  14. Z-strain-3-PS (PSP10084) — 0.037
  15. PES-2-SW (PSP10008) — 0.038
  16. Huautla-2-redo-SW (PSP10030) — 0.039
  17. GoldenCoast-BAF-A2-UM (PSP10106) — 0.046
  18. Orissa-India-ITW (PSP10071) — 0.047
  19. GoldenCoast-BAF-B1-UM (PSP10107) — 0.047
  20. GoldenCoast-BAF-A1-UM (PSP10105) — 0.047

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.721
  2. Penvy-Col5-PS (PSP10044) — 0.721
  3. Penvy-Col4-PS (PSP10043) — 0.721
  4. Penvy-2-SW (PSP10075) — 0.720
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.665
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.663
  7. Treasure-coast-2-PS (PSP10055) — 0.651
  8. Treasure-coast-1-PS (PSP10054) — 0.650
  9. Treasure-coast-3-PS (PSP10056) — 0.650
  10. Treasure-Coast-2-Mush (PSP10082) — 0.649
  11. Costa-Rica-3-redo-SW (PSP10024) — 0.631
  12. Bplus-ITW-WM (PSP10129) — 0.618
  13. Orissa-India-1-Mush (PSP10072) — 0.610
  14. Arenal-Volcano-1-Mush (PSP10059) — 0.607
  15. Orissa-India-4-Mush (PSP10073) — 0.606
  16. Luminous-lucies-2-PS (PSP10032) — 0.603
  17. ColumbiaRust-1-SW (PSP10021) — 0.602
  18. Luminous-lucies-3-PS (PSP10033) — 0.602
  19. Luminous-lucies-1-PS (PSP10034) — 0.602
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.601

Sequence Data Downloads

Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.

Blockchain Registration Information

Transaction ID
5d51584de0fe0def78aea0a6d4c433db6c5b339f855450649bc67cdcc021f2fc
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
302ba3a8e323742fddef2a40a6b2a93c240ac049642c158e9ee1e22d39807762

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