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Gulf-Coast

PSP 10091

DNA Source: USA Mycology & More

General Information

Accession Date
March 15, 2022
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
417
No. of Contigs (>= 50K bp)
208
Total Length (>= 25K bp)
28,702,257
Total Length (>= 50K bp)
21,149,429
Total Contigs
2,732
Largest Contig
419,590
Total Length
39,554,149
GC (%)
46.11
N50
54,678

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Gulf-Coast-BAF (PSP10090) — 0.023
  2. GoldenCoast-BAF-B2-UM (PSP10108) — 0.025
  3. GoldenCoast-BAF-B1-UM (PSP10107) — 0.025
  4. Golden-Teacher (PSP10089) — 0.037
  5. Z-strain-3-PS (PSP10084) — 0.042
  6. Puerto-Rican-ITW (PSP10078) — 0.045
  7. GoldenTeacher-3-SW (PSP10029) — 0.050
  8. Huautla-3-PS (PSP10005) — 0.051
  9. Maui-2-PS (PSP10041) — 0.052
  10. Ecuador-3-SW (PSP10025) — 0.052
  11. Ecuador-3-PS (PSP10061) — 0.053
  12. Huautla-3-redo-SW (PSP10031) — 0.054
  13. Maui-1-PS (PSP10040) — 0.055
  14. Maui-3-PS (PSP10042) — 0.055
  15. Huautla-2-redo-SW (PSP10030) — 0.057
  16. GoldenCoast-BAF-A2-UM (PSP10106) — 0.058
  17. GoldenTeacher-2-SW (PSP10028) — 0.058
  18. GoldenTeacher-1-SW (PSP10027) — 0.059
  19. GoldenCoast-BAF-A1-UM (PSP10105) — 0.060
  20. PES-2-SW (PSP10008) — 0.060

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.718
  2. Penvy-Col5-PS (PSP10044) — 0.717
  3. Penvy-Col4-PS (PSP10043) — 0.717
  4. Penvy-2-SW (PSP10075) — 0.716
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.662
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.659
  7. Treasure-coast-1-PS (PSP10054) — 0.651
  8. Treasure-coast-2-PS (PSP10055) — 0.651
  9. Treasure-coast-3-PS (PSP10056) — 0.651
  10. Treasure-Coast-2-Mush (PSP10082) — 0.649
  11. Costa-Rica-3-redo-SW (PSP10024) — 0.630
  12. Bplus-ITW-WM (PSP10129) — 0.616
  13. Orissa-India-1-Mush (PSP10072) — 0.610
  14. Arenal-Volcano-1-Mush (PSP10059) — 0.609
  15. Orissa-India-4-Mush (PSP10073) — 0.608
  16. ColumbiaRust-1-SW (PSP10021) — 0.607
  17. Luminous-lucies-2-PS (PSP10032) — 0.606
  18. Luminous-lucies-1-PS (PSP10034) — 0.605
  19. Luminous-lucies-3-PS (PSP10033) — 0.605
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.604

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
130f15f8e236b76bb7fd85f769b4f42afb8171f9b568b1c830771623ef303fa6
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
c4cf905c46bcc9089d75e8b393a8c6a7a9e6ed6d03f7d7f56181ea29ff18a69e

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