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GoldenCoast-UM

PSP 10109

DNA Source: USA Mycology & More

General Information

Accession Date
June 1, 2022
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
268
No. of Contigs (>= 50K bp)
25
Total Length (>= 25K bp)
9,515,677
Total Length (>= 50K bp)
1,543,434
Total Contigs
6,008
Largest Contig
103,918
Total Length
40,057,379
GC (%)
46.15
N50
14,476

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiH 2 variants — 2 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiH
MODERATE p.Phe116del c.346_348delTTC conservative inframe deletion GTTC/G
CM039007.1:1667959
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 4 variants — 4 MODERATE
PsiD
MODERATE p.Gln253Lys c.757C>A missense variant G/T
CM039007.1:1676745
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. GoldenTeacher-3-SW (PSP10029) — 0.052
  2. Ecuador-3-SW (PSP10025) — 0.053
  3. Maui-2-PS (PSP10041) — 0.054
  4. Maui-1-PS (PSP10040) — 0.056
  5. Maui-3-PS (PSP10042) — 0.056
  6. GoldenTeacher-2-SW (PSP10028) — 0.056
  7. Ecuador-3-PS (PSP10061) — 0.057
  8. Golden-Teacher (PSP10089) — 0.058
  9. GoldenTeacher-1-SW (PSP10027) — 0.058
  10. Bplus-2-redo-SW (PSP10015) — 0.061
  11. Bplus-1-redo-SW (PSP10014) — 0.061
  12. Bplus (PSP10088) — 0.061
  13. Bplus-3-redo-SW (PSP10016) — 0.061
  14. Huautla-3-PS (PSP10005) — 0.063
  15. HUA-Early (PSP10092) — 0.064
  16. Huautla-3-redo-SW (PSP10031) — 0.064
  17. Huautla-2-redo-SW (PSP10030) — 0.065
  18. Z-strain-3-PS (PSP10084) — 0.065
  19. PES-2-SW (PSP10008) — 0.066
  20. Bplus-3-PS (PSP10001) — 0.068

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.703
  2. Penvy-Col5-PS (PSP10044) — 0.703
  3. Penvy-Col4-PS (PSP10043) — 0.703
  4. Penvy-2-SW (PSP10075) — 0.702
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.653
  6. Treasure-coast-1-PS (PSP10054) — 0.651
  7. Treasure-coast-3-PS (PSP10056) — 0.650
  8. Treasure-coast-2-PS (PSP10055) — 0.650
  9. Treasure-Coast-2-Mush (PSP10082) — 0.649
  10. Costa-Rica-2-redo-SW (PSP10023) — 0.649
  11. Costa-Rica-3-redo-SW (PSP10024) — 0.622
  12. Bplus-ITW-WM (PSP10129) — 0.611
  13. Arenal-Volcano-1-Mush (PSP10059) — 0.606
  14. Luminous-lucies-2-PS (PSP10032) — 0.602
  15. Luminous-lucies-3-PS (PSP10033) — 0.602
  16. Luminous-lucies-1-PS (PSP10034) — 0.602
  17. Orissa-India-1-Mush (PSP10072) — 0.601
  18. Roatan-Honduras-4-Mush (PSP10079) — 0.601
  19. Orissa-India-4-Mush (PSP10073) — 0.601
  20. ColumbiaRust-1-SW (PSP10021) — 0.600

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
bb204ee5beefa05011072c6d0ac2913314cf15e26a7c7fd41ca62c7267eb299b
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
b070d338f30057ae0d2f275852077c3f6fb195c7f3e2a1c70e1d083483ada818

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