GoldenCoast-BAF-A1-UM
PSP 10105
DNA Source: USA Mycology & More
General Information
- Accession Date
- June 1, 2022
- Report Type
- Whole-Genome Sequencing
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 408
- No. of Contigs (>= 50K bp)
- 201
- Total Length (>= 25K bp)
- 30,640,077
- Total Length (>= 50K bp)
- 23,154,783
- Total Contigs
- 2,915
- Largest Contig
- 476,440
- Total Length
- 40,362,216
- GC (%)
- 46.1
- N50
- 65,273
Variants
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Orissa-India-ITW (PSP10071) — 0.027
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.027
- Bplus-3-PS (PSP10001) — 0.027
- McKennaii-1-PS (PSP10069) — 0.030
- Bplus (PSP10088) — 0.040
- Golden-Teacher (PSP10089) — 0.041
- HUA-Early (PSP10092) — 0.043
- Bplus-2-redo-SW (PSP10015) — 0.045
- Bplus-1-redo-SW (PSP10014) — 0.047
- Bplus-3-redo-SW (PSP10016) — 0.047
- GoldenTeacher-3-SW (PSP10029) — 0.047
- Huautla-3-PS (PSP10005) — 0.048
- Maui-2-PS (PSP10041) — 0.049
- Ecuador-3-SW (PSP10025) — 0.049
- Huautla-3-redo-SW (PSP10031) — 0.051
- Maui-1-PS (PSP10040) — 0.051
- Maui-3-PS (PSP10042) — 0.052
- Z-strain-3-PS (PSP10084) — 0.052
- Ecuador-3-PS (PSP10061) — 0.052
- Puerto-Rican-ITW (PSP10078) — 0.053
Most Distant
- Penvy-1-PS (PSP10045) — 0.724
- Penvy-Col5-PS (PSP10044) — 0.724
- Penvy-Col4-PS (PSP10043) — 0.724
- Penvy-2-SW (PSP10075) — 0.723
- Costa-Rica-1-redo-SW (PSP10022) — 0.666
- Costa-Rica-2-redo-SW (PSP10023) — 0.665
- Treasure-coast-1-PS (PSP10054) — 0.662
- Treasure-coast-3-PS (PSP10056) — 0.661
- Treasure-coast-2-PS (PSP10055) — 0.661
- Treasure-Coast-2-Mush (PSP10082) — 0.659
- Costa-Rica-3-redo-SW (PSP10024) — 0.637
- Bplus-ITW-WM (PSP10129) — 0.622
- Arenal-Volcano-1-Mush (PSP10059) — 0.616
- Orissa-India-4-Mush (PSP10073) — 0.613
- Luminous-lucies-2-PS (PSP10032) — 0.612
- Orissa-India-1-Mush (PSP10072) — 0.612
- Roatan-Honduras-4-Mush (PSP10079) — 0.612
- Luminous-lucies-1-PS (PSP10034) — 0.612
- Luminous-lucies-3-PS (PSP10033) — 0.611
- ColumbiaRust-1-SW (PSP10021) — 0.607
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
ba7335a6ad4d0e46
7ef9f7414f6a3988 953175c973464cc6 12fcd0c340154cf4 - Stamping Certificate
- Download PDF (39.8 KB)
- SHASUM Hash
-
01e5ef32038945582f957a9b34291662 073421529df31c6f 2901b96f2c5c02bb