Roatan-Honduras-4-Mush
PSP 10079
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 390
- No. of Contigs (>= 50K bp)
- 183
- Total Length (>= 25K bp)
- 25,722,612
- Total Length (>= 50K bp)
- 18,364,355
- Total Contigs
- 6,716
- Largest Contig
- 482,236
- Total Length
- 47,126,157
- GC (%)
- 46.57
- N50
- 32,033
Variants
PsiT1
6 variants
—
6 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Lys166Gln
c.496A>C
missense variant
A/C
CM039007.1:1663979
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiM
4 variants
—
2 HIGH 2 MODERATE
PsiM
HIGH
p.Ter310Tyrext*?
c.930G>T
stop lost & splice region variant
C/A
CM039007.1:1673493
PsiM
HIGH
p.Trp243*
c.729G>A
stop gained
C/T
CM039007.1:1673826
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiM
MODERATE
p.Val72Leu
c.214G>C
missense variant & splice region variant
C/G
CM039007.1:1674719
PsiD
2 variants
—
2 MODERATE
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
PsiD
MODERATE
p.Gln2Arg
c.5A>G
missense variant
T/C
CM039007.1:1677603
Genetic Relatives
Nearest
- Arenal-Volcano-1-Mush (PSP10059) — 0.295
- Luminous-lucies-2-PS (PSP10032) — 0.295
- Luminous-lucies-1-PS (PSP10034) — 0.295
- Luminous-lucies-3-PS (PSP10033) — 0.295
- Orissa-India-4-Mush (PSP10073) — 0.300
- Treasure-Coast-2-Mush (PSP10082) — 0.302
- Treasure-coast-3-PS (PSP10056) — 0.302
- Treasure-coast-1-PS (PSP10054) — 0.303
- Treasure-coast-2-PS (PSP10055) — 0.303
- Costa-Rica-3-redo-SW (PSP10024) — 0.310
- ColumbiaRust-1-SW (PSP10021) — 0.314
- Bplus-ITW-WM (PSP10129) — 0.315
- Penvy-2-SW (PSP10075) — 0.321
- Penvy-1-PS (PSP10045) — 0.321
- Penvy-Col5-PS (PSP10044) — 0.321
- Penvy-Col4-PS (PSP10043) — 0.321
- Tosohatchee-print-ITW (PSP10081) — 0.322
- Costa-Rica-1-redo-SW (PSP10022) — 0.323
- MGC_2016_unknown_strain (PSP10012) — 0.323
- Costa-Rica-2-redo-SW (PSP10023) — 0.325
Most Distant
- Bplus-3-PS (PSP10001) — 0.615
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.612
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.610
- Orissa-India-ITW (PSP10071) — 0.608
- Bplus (PSP10088) — 0.607
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.607
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.606
- HUA-Early (PSP10092) — 0.606
- Puerto-Rican-ITW (PSP10078) — 0.605
- McKennaii-1-PS (PSP10069) — 0.605
- Bplus-1-redo-SW (PSP10014) — 0.604
- Bplus-2-redo-SW (PSP10015) — 0.604
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.604
- Gulf-Coast-BAF (PSP10090) — 0.604
- Bplus-3-redo-SW (PSP10016) — 0.604
- Gulf-Coast (PSP10091) — 0.604
- Huautla-2-redo-SW (PSP10030) — 0.603
- Ecuador-3-SW (PSP10025) — 0.602
- GoldenTeacher-3-SW (PSP10029) — 0.601
- Huautla-3-redo-SW (PSP10031) — 0.601
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
3e2520137758c70a
ce7b378adbd2ae1b 65b88a9734eb3207 fb5fc73bf89d06cf - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
b895b87c0a8a9fe58782916f3ff063e4 fd25b20176946227 0c717afa23f39e5c