Roatan-Honduras-4-Mush
PSP 10079
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 390
- No. of Contigs (>= 50K bp)
- 183
- Total Length (>= 25K bp)
- 25,722,612
- Total Length (>= 50K bp)
- 18,364,355
- Total Contigs
- 6,716
- Largest Contig
- 482,236
- Total Length
- 47,126,157
- GC (%)
- 46.57
- N50
- 32,033
Variants
PsiT1
6 variants
—
6 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Lys166Gln
c.496A>C
missense variant
A/C
CM039007.1:1663979
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiM
4 variants
—
2 HIGH 2 MODERATE
PsiM
HIGH
p.Ter310Tyrext*?
c.930G>T
stop lost & splice region variant
C/A
CM039007.1:1673493
PsiM
HIGH
p.Trp243*
c.729G>A
stop gained
C/T
CM039007.1:1673826
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiM
MODERATE
p.Val72Leu
c.214G>C
missense variant & splice region variant
C/G
CM039007.1:1674719
PsiD
2 variants
—
2 MODERATE
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
PsiD
MODERATE
p.Gln2Arg
c.5A>G
missense variant
T/C
CM039007.1:1677603
Genetic Relatives
Nearest
- Arenal-Volcano-1-Mush (PSP10059) — 0.295
- Luminous-lucies-2-PS (PSP10032) — 0.295
- Luminous-lucies-1-PS (PSP10034) — 0.295
- Luminous-lucies-3-PS (PSP10033) — 0.295
- Orissa-India-4-Mush (PSP10073) — 0.300
- Treasure-Coast-2-Mush (PSP10082) — 0.302
- Treasure-coast-3-PS (PSP10056) — 0.302
- Treasure-coast-1-PS (PSP10054) — 0.303
- Treasure-coast-2-PS (PSP10055) — 0.303
- Costa-Rica-3-redo-SW (PSP10024) — 0.310
- ColumbiaRust-1-SW (PSP10021) — 0.314
- Bplus-ITW-WM (PSP10129) — 0.315
- Penvy-2-SW (PSP10075) — 0.321
- Penvy-1-PS (PSP10045) — 0.321
- Penvy-Col5-PS (PSP10044) — 0.321
- Penvy-Col4-PS (PSP10043) — 0.321
- Tosohatchee-print-ITW (PSP10081) — 0.322
- Costa-Rica-1-redo-SW (PSP10022) — 0.323
- MGC_2016_unknown_strain (PSP10012) — 0.323
- Costa-Rica-2-redo-SW (PSP10023) — 0.325
Most Distant
- Bplus-3-PS (PSP10001) — 0.615
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.612
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.610
- Orissa-India-ITW (PSP10071) — 0.608
- Bplus (PSP10088) — 0.607
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.607
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.606
- HUA-Early (PSP10092) — 0.606
- Puerto-Rican-ITW (PSP10078) — 0.605
- McKennaii-1-PS (PSP10069) — 0.605
- Bplus-1-redo-SW (PSP10014) — 0.604
- Bplus-2-redo-SW (PSP10015) — 0.604
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.604
- Gulf-Coast-BAF (PSP10090) — 0.604
- Bplus-3-redo-SW (PSP10016) — 0.604
- Gulf-Coast (PSP10091) — 0.604
- Huautla-2-redo-SW (PSP10030) — 0.603
- Ecuador-3-SW (PSP10025) — 0.602
- GoldenTeacher-3-SW (PSP10029) — 0.601
- Huautla-3-redo-SW (PSP10031) — 0.601
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
3e2520137758c70a
ce7b378adbd2ae1b 65b88a9734eb3207 fb5fc73bf89d06cf - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
b895b87c0a8a9fe58782916f3ff063e4 fd25b20176946227 0c717afa23f39e5c