Orissa-India-ITW
PSP 10071
DNA Source: Inoculate the World
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- inoculatetheworld.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 402
- No. of Contigs (>= 50K bp)
- 212
- Total Length (>= 25K bp)
- 30,248,610
- Total Length (>= 50K bp)
- 23,344,828
- Total Contigs
- 2,455
- Largest Contig
- 456,916
- Total Length
- 39,982,312
- GC (%)
- 46.12
- N50
- 66,082
Variants
PsiT1
5 variants
—
5 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- McKennaii-1-PS (PSP10069) — 0.022
- Bplus-3-PS (PSP10001) — 0.023
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.027
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.030
- Bplus (PSP10088) — 0.035
- HUA-Early (PSP10092) — 0.038
- Golden-Teacher (PSP10089) — 0.041
- Bplus-2-redo-SW (PSP10015) — 0.045
- Bplus-1-redo-SW (PSP10014) — 0.047
- Bplus-3-redo-SW (PSP10016) — 0.047
- GoldenTeacher-3-SW (PSP10029) — 0.047
- Huautla-3-PS (PSP10005) — 0.047
- Maui-2-PS (PSP10041) — 0.048
- Ecuador-3-SW (PSP10025) — 0.049
- Ecuador-3-PS (PSP10061) — 0.049
- Z-strain-3-PS (PSP10084) — 0.050
- Maui-1-PS (PSP10040) — 0.051
- Maui-3-PS (PSP10042) — 0.051
- Huautla-3-redo-SW (PSP10031) — 0.051
- Puerto-Rican-ITW (PSP10078) — 0.054
Most Distant
- Penvy-1-PS (PSP10045) — 0.722
- Penvy-Col5-PS (PSP10044) — 0.722
- Penvy-Col4-PS (PSP10043) — 0.722
- Penvy-2-SW (PSP10075) — 0.721
- Costa-Rica-1-redo-SW (PSP10022) — 0.665
- Costa-Rica-2-redo-SW (PSP10023) — 0.662
- Treasure-coast-1-PS (PSP10054) — 0.659
- Treasure-coast-3-PS (PSP10056) — 0.659
- Treasure-coast-2-PS (PSP10055) — 0.659
- Treasure-Coast-2-Mush (PSP10082) — 0.656
- Costa-Rica-3-redo-SW (PSP10024) — 0.634
- Bplus-ITW-WM (PSP10129) — 0.620
- Arenal-Volcano-1-Mush (PSP10059) — 0.614
- Luminous-lucies-2-PS (PSP10032) — 0.610
- Orissa-India-1-Mush (PSP10072) — 0.610
- Luminous-lucies-1-PS (PSP10034) — 0.610
- Orissa-India-4-Mush (PSP10073) — 0.610
- Luminous-lucies-3-PS (PSP10033) — 0.610
- Roatan-Honduras-4-Mush (PSP10079) — 0.608
- ColumbiaRust-1-SW (PSP10021) — 0.605
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
e5635105fb4d2d1c
d66e3519586d1262 05673327b68d9a89 72b69a5ed948ddc9 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
3de7c0c2be1a76c2956c5dc197f41848 c210f7292b6d9e2e 9d9b54fe417fd808