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Gulf-Coast-BAF

PSP 10090

DNA Source: USA Mycology & More

General Information

Accession Date
March 15, 2022
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
411
No. of Contigs (>= 50K bp)
207
Total Length (>= 25K bp)
28,668,973
Total Length (>= 50K bp)
21,282,764
Total Contigs
3,017
Largest Contig
414,694
Total Length
39,715,135
GC (%)
46.1
N50
56,594

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Gulf-Coast (PSP10091) — 0.023
  2. GoldenCoast-BAF-B2-UM (PSP10108) — 0.025
  3. GoldenCoast-BAF-B1-UM (PSP10107) — 0.026
  4. Golden-Teacher (PSP10089) — 0.038
  5. Z-strain-3-PS (PSP10084) — 0.044
  6. Puerto-Rican-ITW (PSP10078) — 0.046
  7. GoldenTeacher-3-SW (PSP10029) — 0.050
  8. Huautla-3-PS (PSP10005) — 0.052
  9. Ecuador-3-SW (PSP10025) — 0.053
  10. Maui-2-PS (PSP10041) — 0.053
  11. Ecuador-3-PS (PSP10061) — 0.055
  12. Maui-1-PS (PSP10040) — 0.055
  13. Huautla-3-redo-SW (PSP10031) — 0.055
  14. Maui-3-PS (PSP10042) — 0.056
  15. Huautla-2-redo-SW (PSP10030) — 0.057
  16. GoldenCoast-BAF-A2-UM (PSP10106) — 0.058
  17. GoldenTeacher-2-SW (PSP10028) — 0.058
  18. GoldenTeacher-1-SW (PSP10027) — 0.060
  19. GoldenCoast-BAF-A1-UM (PSP10105) — 0.061
  20. PES-2-SW (PSP10008) — 0.061

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.717
  2. Penvy-Col5-PS (PSP10044) — 0.717
  3. Penvy-Col4-PS (PSP10043) — 0.717
  4. Penvy-2-SW (PSP10075) — 0.716
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.662
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.658
  7. Treasure-coast-1-PS (PSP10054) — 0.651
  8. Treasure-coast-2-PS (PSP10055) — 0.651
  9. Treasure-coast-3-PS (PSP10056) — 0.651
  10. Treasure-Coast-2-Mush (PSP10082) — 0.649
  11. Costa-Rica-3-redo-SW (PSP10024) — 0.630
  12. Bplus-ITW-WM (PSP10129) — 0.616
  13. Orissa-India-1-Mush (PSP10072) — 0.610
  14. Arenal-Volcano-1-Mush (PSP10059) — 0.610
  15. Orissa-India-4-Mush (PSP10073) — 0.608
  16. ColumbiaRust-1-SW (PSP10021) — 0.607
  17. Luminous-lucies-2-PS (PSP10032) — 0.606
  18. Luminous-lucies-3-PS (PSP10033) — 0.606
  19. Luminous-lucies-1-PS (PSP10034) — 0.606
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.604

Sequence Data Downloads

Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.

Blockchain Registration Information

Transaction ID
a5574965e63317ab6ba8106afdb0b80b655c7348e1ff4d5ddf8277c7f8c27687
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
f94ac9ce7162d7a33b46d4090f9bc96ae41ff487b9dd4bbb6108a7dfd5af572c

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