HUA-Early

PSP 10092

DNA Source: USA Mycology & More

General Information

Accession Date
March 15, 2022
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
426
No. of Contigs (>= 50K bp)
184
Total Length (>= 25K bp)
25,978,184
Total Length (>= 50K bp)
17,460,639
Total Contigs
3,338
Largest Contig
436,453
Total Length
39,418,668
GC (%)
46.07
N50
41,963

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.709G>T p.Ala237Ser missense variant moderate CM039007.1 1664305

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.029 Bplus (PSP10088)
  2. 0.038 Orissa-India-ITW (PSP10071)
  3. 0.041 McKennaii-1-PS (PSP10069)
  4. 0.043 Bplus-3-PS (PSP10001)
  5. 0.043 GoldenCoast-BAF-A1-UM (PSP10105)
  6. 0.045 GoldenCoast-BAF-A2-UM (PSP10106)
  7. 0.055 Golden-Teacher (PSP10089)
  8. 0.055 Bplus-2-redo-SW (PSP10015)
  9. 0.055 GoldenTeacher-3-SW (PSP10029)
  10. 0.056 Bplus-1-redo-SW (PSP10014)
  11. 0.056 Bplus-3-redo-SW (PSP10016)
  12. 0.058 Ecuador-3-SW (PSP10025)
  13. 0.058 Maui-2-PS (PSP10041)
  14. 0.060 Ecuador-3-PS (PSP10061)
  15. 0.060 Maui-1-PS (PSP10040)
  16. 0.061 Maui-3-PS (PSP10042)
  17. 0.062 GoldenTeacher-2-SW (PSP10028)
  18. 0.062 True-Albino-Teacher-ITW-WM (PSP10140)
  19. 0.064 GoldenCoast-UM (PSP10109)
  20. 0.065 GoldenTeacher-1-SW (PSP10027)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.706 Penvy-1-PS (PSP10045)
  2. 0.706 Penvy-Col5-PS (PSP10044)
  3. 0.706 Penvy-Col4-PS (PSP10043)
  4. 0.705 Penvy-2-SW (PSP10075)
  5. 0.655 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.654 Treasure-coast-3-PS (PSP10056)
  7. 0.654 Treasure-coast-2-PS (PSP10055)
  8. 0.654 Treasure-coast-1-PS (PSP10054)
  9. 0.652 Treasure-Coast-2-Mush (PSP10082)
  10. 0.652 Costa-Rica-2-redo-SW (PSP10023)
  11. 0.625 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.614 Bplus-ITW-WM (PSP10129)
  13. 0.610 Arenal-Volcano-1-Mush (PSP10059)
  14. 0.607 Luminous-lucies-2-PS (PSP10032)
  15. 0.607 Luminous-lucies-1-PS (PSP10034)
  16. 0.606 Luminous-lucies-3-PS (PSP10033)
  17. 0.606 Roatan-Honduras-4-Mush (PSP10079)
  18. 0.604 ColumbiaRust-1-SW (PSP10021)
  19. 0.602 Orissa-India-4-Mush (PSP10073)
  20. 0.600 Orissa-India-1-Mush (PSP10072)

Blockchain Registration Information

Transaction ID
bef47ffd30f52b9f55ed74d6a01d29f7e82d4a5700aadab8dfdff4666043bc50
Stamping Certificate
Download PDF (39.4 KB)
SHASUM Hash
11497cffe8b2d695854f2672066304763a4d1bf05bb887bbde986fc074b83ff8
QR code for PSP10092

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