HUA-Early
PSP 10092
DNA Source: USA Mycology & More
General Information
- Accession Date
- March 15, 2022
- Report Type
- Whole-Genome Sequencing
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 426
- No. of Contigs (>= 50K bp)
- 184
- Total Length (>= 25K bp)
- 25,978,184
- Total Length (>= 50K bp)
- 17,460,639
- Total Contigs
- 3,338
- Largest Contig
- 436,453
- Total Length
- 39,418,668
- GC (%)
- 46.07
- N50
- 41,963
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.709G>T | p.Ala237Ser | missense variant | moderate | CM039007.1 | 1664305 | G/T |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.029 Bplus (PSP10088)
- 0.038 Orissa-India-ITW (PSP10071)
- 0.041 McKennaii-1-PS (PSP10069)
- 0.043 Bplus-3-PS (PSP10001)
- 0.043 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.045 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.055 Golden-Teacher (PSP10089)
- 0.055 Bplus-2-redo-SW (PSP10015)
- 0.055 GoldenTeacher-3-SW (PSP10029)
- 0.056 Bplus-1-redo-SW (PSP10014)
- 0.056 Bplus-3-redo-SW (PSP10016)
- 0.058 Ecuador-3-SW (PSP10025)
- 0.058 Maui-2-PS (PSP10041)
- 0.060 Ecuador-3-PS (PSP10061)
- 0.060 Maui-1-PS (PSP10040)
- 0.061 Maui-3-PS (PSP10042)
- 0.062 GoldenTeacher-2-SW (PSP10028)
- 0.062 True-Albino-Teacher-ITW-WM (PSP10140)
- 0.064 GoldenCoast-UM (PSP10109)
- 0.065 GoldenTeacher-1-SW (PSP10027)
Most genetically distant strains (All Samples)
- 0.706 Penvy-1-PS (PSP10045)
- 0.706 Penvy-Col5-PS (PSP10044)
- 0.706 Penvy-Col4-PS (PSP10043)
- 0.705 Penvy-2-SW (PSP10075)
- 0.655 Costa-Rica-1-redo-SW (PSP10022)
- 0.654 Treasure-coast-3-PS (PSP10056)
- 0.654 Treasure-coast-2-PS (PSP10055)
- 0.654 Treasure-coast-1-PS (PSP10054)
- 0.652 Treasure-Coast-2-Mush (PSP10082)
- 0.652 Costa-Rica-2-redo-SW (PSP10023)
- 0.625 Costa-Rica-3-redo-SW (PSP10024)
- 0.614 Bplus-ITW-WM (PSP10129)
- 0.610 Arenal-Volcano-1-Mush (PSP10059)
- 0.607 Luminous-lucies-2-PS (PSP10032)
- 0.607 Luminous-lucies-1-PS (PSP10034)
- 0.606 Luminous-lucies-3-PS (PSP10033)
- 0.606 Roatan-Honduras-4-Mush (PSP10079)
- 0.604 ColumbiaRust-1-SW (PSP10021)
- 0.602 Orissa-India-4-Mush (PSP10073)
- 0.600 Orissa-India-1-Mush (PSP10072)
Blockchain Registration Information
- Transaction ID
-
bef47ffd30f52b9f
55ed74d6a01d29f7 e82d4a5700aadab8 dfdff4666043bc50 - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
11497cffe8b2d695
854f267206630476 3a4d1bf05bb887bb de986fc074b83ff8