HUA-Early
PSP 10092
DNA Source: USA Mycology & More
General Information
- Accession Date
- March 15, 2022
- Report Type
- Whole-Genome Sequencing
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 426
- No. of Contigs (>= 50K bp)
- 184
- Total Length (>= 25K bp)
- 25,978,184
- Total Length (>= 50K bp)
- 17,460,639
- Total Contigs
- 3,338
- Largest Contig
- 436,453
- Total Length
- 39,418,668
- GC (%)
- 46.07
- N50
- 41,963
Variants
PsiT1
6 variants
—
6 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Ala237Ser
c.709G>T
missense variant
G/T
CM039007.1:1664305
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Bplus (PSP10088) — 0.029
- Orissa-India-ITW (PSP10071) — 0.038
- McKennaii-1-PS (PSP10069) — 0.041
- Bplus-3-PS (PSP10001) — 0.043
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.043
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.045
- Golden-Teacher (PSP10089) — 0.055
- Bplus-2-redo-SW (PSP10015) — 0.055
- GoldenTeacher-3-SW (PSP10029) — 0.055
- Bplus-1-redo-SW (PSP10014) — 0.056
- Bplus-3-redo-SW (PSP10016) — 0.056
- Ecuador-3-SW (PSP10025) — 0.058
- Maui-2-PS (PSP10041) — 0.058
- Ecuador-3-PS (PSP10061) — 0.060
- Maui-1-PS (PSP10040) — 0.060
- Maui-3-PS (PSP10042) — 0.061
- GoldenTeacher-2-SW (PSP10028) — 0.062
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.062
- GoldenCoast-UM (PSP10109) — 0.064
- GoldenTeacher-1-SW (PSP10027) — 0.065
Most Distant
- Penvy-1-PS (PSP10045) — 0.706
- Penvy-Col5-PS (PSP10044) — 0.706
- Penvy-Col4-PS (PSP10043) — 0.706
- Penvy-2-SW (PSP10075) — 0.705
- Costa-Rica-1-redo-SW (PSP10022) — 0.655
- Treasure-coast-3-PS (PSP10056) — 0.654
- Treasure-coast-2-PS (PSP10055) — 0.654
- Treasure-coast-1-PS (PSP10054) — 0.654
- Treasure-Coast-2-Mush (PSP10082) — 0.652
- Costa-Rica-2-redo-SW (PSP10023) — 0.652
- Costa-Rica-3-redo-SW (PSP10024) — 0.625
- Bplus-ITW-WM (PSP10129) — 0.614
- Arenal-Volcano-1-Mush (PSP10059) — 0.610
- Luminous-lucies-2-PS (PSP10032) — 0.607
- Luminous-lucies-1-PS (PSP10034) — 0.607
- Luminous-lucies-3-PS (PSP10033) — 0.606
- Roatan-Honduras-4-Mush (PSP10079) — 0.606
- ColumbiaRust-1-SW (PSP10021) — 0.604
- Orissa-India-4-Mush (PSP10073) — 0.602
- Orissa-India-1-Mush (PSP10072) — 0.600
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
bef47ffd30f52b9f
55ed74d6a01d29f7 e82d4a5700aadab8 dfdff4666043bc50 - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
11497cffe8b2d695854f267206630476 3a4d1bf05bb887bb de986fc074b83ff8