GoldenCoast-BAF-A2-UM
PSP 10106
DNA Source: USA Mycology & More
General Information
- Accession Date
- June 1, 2022
- Report Type
- Whole-Genome Sequencing
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 402
- No. of Contigs (>= 50K bp)
- 204
- Total Length (>= 25K bp)
- 30,110,127
- Total Length (>= 50K bp)
- 22,961,361
- Total Contigs
- 2,524
- Largest Contig
- 476,444
- Total Length
- 39,922,302
- GC (%)
- 46.13
- N50
- 65,462
Variants
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.027
- Orissa-India-ITW (PSP10071) — 0.030
- Bplus-3-PS (PSP10001) — 0.032
- McKennaii-1-PS (PSP10069) — 0.032
- Golden-Teacher (PSP10089) — 0.039
- Bplus (PSP10088) — 0.041
- HUA-Early (PSP10092) — 0.045
- Bplus-2-redo-SW (PSP10015) — 0.046
- GoldenTeacher-3-SW (PSP10029) — 0.046
- Bplus-1-redo-SW (PSP10014) — 0.047
- Huautla-3-PS (PSP10005) — 0.047
- Bplus-3-redo-SW (PSP10016) — 0.047
- Ecuador-3-SW (PSP10025) — 0.048
- Maui-2-PS (PSP10041) — 0.048
- Maui-1-PS (PSP10040) — 0.050
- Huautla-3-redo-SW (PSP10031) — 0.050
- Z-strain-3-PS (PSP10084) — 0.050
- Ecuador-3-PS (PSP10061) — 0.051
- Maui-3-PS (PSP10042) — 0.051
- Huautla-2-redo-SW (PSP10030) — 0.052
Most Distant
- Penvy-1-PS (PSP10045) — 0.722
- Penvy-Col5-PS (PSP10044) — 0.722
- Penvy-Col4-PS (PSP10043) — 0.722
- Penvy-2-SW (PSP10075) — 0.721
- Costa-Rica-1-redo-SW (PSP10022) — 0.665
- Costa-Rica-2-redo-SW (PSP10023) — 0.663
- Treasure-coast-1-PS (PSP10054) — 0.660
- Treasure-coast-3-PS (PSP10056) — 0.660
- Treasure-coast-2-PS (PSP10055) — 0.660
- Treasure-Coast-2-Mush (PSP10082) — 0.658
- Costa-Rica-3-redo-SW (PSP10024) — 0.635
- Bplus-ITW-WM (PSP10129) — 0.622
- Arenal-Volcano-1-Mush (PSP10059) — 0.615
- Luminous-lucies-2-PS (PSP10032) — 0.611
- Orissa-India-4-Mush (PSP10073) — 0.611
- Orissa-India-1-Mush (PSP10072) — 0.611
- Luminous-lucies-3-PS (PSP10033) — 0.611
- Luminous-lucies-1-PS (PSP10034) — 0.611
- Roatan-Honduras-4-Mush (PSP10079) — 0.610
- ColumbiaRust-1-SW (PSP10021) — 0.607
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
74e6e102e16741b5
e28188b51979dd43 287a2c31e18d38a0 6175247b92901e99 - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
362c713c573df544981f04474b2a863a fc3db112837b289d b8583b810ac923bf