GoldenCoast-BAF-A2-UM
PSP 10106
DNA Source: USA Mycology & More
General Information
- Accession Date
- June 1, 2022
- Report Type
- Whole-Genome Sequencing
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 402
- No. of Contigs (>= 50K bp)
- 204
- Total Length (>= 25K bp)
- 30,110,127
- Total Length (>= 50K bp)
- 22,961,361
- Total Contigs
- 2,524
- Largest Contig
- 476,444
- Total Length
- 39,922,302
- GC (%)
- 46.13
- N50
- 65,462
Variants
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.027
- Orissa-India-ITW (PSP10071) — 0.030
- Bplus-3-PS (PSP10001) — 0.032
- McKennaii-1-PS (PSP10069) — 0.032
- Golden-Teacher (PSP10089) — 0.039
- Bplus (PSP10088) — 0.041
- HUA-Early (PSP10092) — 0.045
- Bplus-2-redo-SW (PSP10015) — 0.046
- GoldenTeacher-3-SW (PSP10029) — 0.046
- Bplus-1-redo-SW (PSP10014) — 0.047
- Huautla-3-PS (PSP10005) — 0.047
- Bplus-3-redo-SW (PSP10016) — 0.047
- Ecuador-3-SW (PSP10025) — 0.048
- Maui-2-PS (PSP10041) — 0.048
- Maui-1-PS (PSP10040) — 0.050
- Huautla-3-redo-SW (PSP10031) — 0.050
- Z-strain-3-PS (PSP10084) — 0.050
- Ecuador-3-PS (PSP10061) — 0.051
- Maui-3-PS (PSP10042) — 0.051
- Huautla-2-redo-SW (PSP10030) — 0.052
Most Distant
- Penvy-1-PS (PSP10045) — 0.722
- Penvy-Col5-PS (PSP10044) — 0.722
- Penvy-Col4-PS (PSP10043) — 0.722
- Penvy-2-SW (PSP10075) — 0.721
- Costa-Rica-1-redo-SW (PSP10022) — 0.665
- Costa-Rica-2-redo-SW (PSP10023) — 0.663
- Treasure-coast-1-PS (PSP10054) — 0.660
- Treasure-coast-3-PS (PSP10056) — 0.660
- Treasure-coast-2-PS (PSP10055) — 0.660
- Treasure-Coast-2-Mush (PSP10082) — 0.658
- Costa-Rica-3-redo-SW (PSP10024) — 0.635
- Bplus-ITW-WM (PSP10129) — 0.622
- Arenal-Volcano-1-Mush (PSP10059) — 0.615
- Luminous-lucies-2-PS (PSP10032) — 0.611
- Orissa-India-4-Mush (PSP10073) — 0.611
- Orissa-India-1-Mush (PSP10072) — 0.611
- Luminous-lucies-3-PS (PSP10033) — 0.611
- Luminous-lucies-1-PS (PSP10034) — 0.611
- Roatan-Honduras-4-Mush (PSP10079) — 0.610
- ColumbiaRust-1-SW (PSP10021) — 0.607
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
74e6e102e16741b5
e28188b51979dd43 287a2c31e18d38a0 6175247b92901e99 - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
362c713c573df544981f04474b2a863a fc3db112837b289d b8583b810ac923bf