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Golden-Teacher_Denver

PSP 10011

DNA Source: Medicinal Genomics

General Information

Accession Date
May 31, 2021
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
347
No. of Contigs (>= 50K bp)
131
Total Length (>= 25K bp)
19,399,446
Total Length (>= 50K bp)
12,001,119
Total Contigs
9,564
Largest Contig
426,957
Total Length
45,794,514
GC (%)
46.1
N50
17,670

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Thailand-Koh-Samui-1-Mush (PSP10080) — 0.228
  2. BM1-UM (PSP10098) — 0.240
  3. BM16 (PSP10087) — 0.252
  4. Ecuador-3-PS (PSP10061) — 0.269
  5. PES-2-SW (PSP10008) — 0.269
  6. Z-strain-3-PS (PSP10084) — 0.270
  7. Blue-Magnolia-Rust-UM-WM (PSP10127) — 0.270
  8. GoldenTeacher-1-SW (PSP10027) — 0.272
  9. GoldenTeacher-3-SW (PSP10029) — 0.274
  10. Ecuador-3-SW (PSP10025) — 0.274
  11. Golden-Teacher (PSP10089) — 0.274
  12. GoldenTeacher-2-SW (PSP10028) — 0.275
  13. Maui-2-PS (PSP10041) — 0.275
  14. Maui-3-PS (PSP10042) — 0.276
  15. Maui-1-PS (PSP10040) — 0.276
  16. Huautla-3-PS (PSP10005) — 0.277
  17. GoldenCoast-BAF-B2-UM (PSP10108) — 0.278
  18. GoldenCoast-BAF-B1-UM (PSP10107) — 0.278
  19. Gulf-Coast (PSP10091) — 0.278
  20. Gulf-Coast-BAF (PSP10090) — 0.278

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.540
  2. Penvy-Col5-PS (PSP10044) — 0.540
  3. Penvy-Col4-PS (PSP10043) — 0.540
  4. Penvy-2-SW (PSP10075) — 0.539
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.520
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.516
  7. Bplus-ITW-WM (PSP10129) — 0.489
  8. Guapile-ITW-col-WM (PSP10132) — 0.488
  9. WFB-UM-WM (PSP10121) — 0.487
  10. WFB-UM (PSP10112) — 0.484
  11. ColumbiaRust-1-SW (PSP10021) — 0.482
  12. Treasure-coast-1-PS (PSP10054) — 0.478
  13. Treasure-coast-3-PS (PSP10056) — 0.478
  14. Treasure-coast-2-PS (PSP10055) — 0.478
  15. Treasure-Coast-2-Mush (PSP10082) — 0.476
  16. Tosohatchee-print-ITW (PSP10081) — 0.475
  17. Costa-Rica-3-redo-SW (PSP10024) — 0.472
  18. Orissa-India-1-Mush (PSP10072) — 0.465
  19. Samui-1-redo-PS (PSP10047) — 0.454
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.451

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
b5c841e7e6d5d21a25c752a1ea7bb126dd9186affbb4ccd648d9264b173d2f3d
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
c6cd509c83d6901ea634fc4b856dae08407adb8bb9939e6036210468f868338b

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