Orissa-India-4-Mush
PSP 10073
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 435
- No. of Contigs (>= 50K bp)
- 181
- Total Length (>= 25K bp)
- 26,177,519
- Total Length (>= 50K bp)
- 17,202,574
- Total Contigs
- 10,901
- Largest Contig
- 458,697
- Total Length
- 47,566,643
- GC (%)
- 46.44
- N50
- 30,635
Variants
PsiT1
21 variants
—
2 HIGH 19 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
HIGH
c.365-1G>A
c.365-1G>A
splice acceptor variant & intron variant
G/A
CM039007.1:1663847
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Thr246Ile
c.737C>T
missense variant
C/T
CM039007.1:1664333
PsiT1
MODERATE
p.Arg266Ser
c.798A>T
missense variant
A/T
CM039007.1:1664394
PsiT1
MODERATE
p.Thr386Ala
c.1156A>G
missense variant
A/G
CM039007.1:1664803
PsiT1
MODERATE
p.Ile505Val
c.1513A>G
missense variant
A/G
CM039007.1:1665277
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Met542Ile
c.1626G>A
missense variant
G/A
CM039007.1:1665570
PsiT1
MODERATE
p.Ile563Leu
c.1687A>C
missense variant
A/C
CM039007.1:1665631
PsiT1
MODERATE
p.Val564Ile
c.1690G>A
missense variant
G/A
CM039007.1:1665634
PsiT1
MODERATE
p.Asn572Asp
c.1714A>G
missense variant
A/G
CM039007.1:1665658
PsiT1
HIGH
c.1720+1G>T
c.1720+1G>T
splice donor variant & intron variant
G/T
CM039007.1:1665665
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Lys622Glu
c.1864A>G
missense variant
A/G
CM039007.1:1666169
PsiT1
MODERATE
p.Ser680Ala
c.2038T>G
missense variant
T/G
CM039007.1:1666406
PsiT1
MODERATE
p.Leu689Val
c.2065T>G
missense variant
T/G
CM039007.1:1666433
PsiT1
MODERATE
p.Glu746Gly
c.2237A>G
missense variant
A/G
CM039007.1:1666605
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiT1
MODERATE
p.Gln858Leu
c.2573A>T
missense variant
A/T
CM039007.1:1666941
Genetic Relatives
Nearest
- Orissa-India-1-Mush (PSP10072) — 0.094
- Penvy-2-SW (PSP10075) — 0.192
- Penvy-1-PS (PSP10045) — 0.192
- Penvy-Col5-PS (PSP10044) — 0.192
- Penvy-Col4-PS (PSP10043) — 0.192
- Roatan-Honduras-4-Mush (PSP10079) — 0.300
- MGC_2016_unknown_strain (PSP10012) — 0.301
- Z-strain-1-Mush (PSP10083) — 0.316
- Costa-Rica-3-redo-SW (PSP10024) — 0.331
- Costa-Rica-1-redo-SW (PSP10022) — 0.331
- Costa-Rica-2-redo-SW (PSP10023) — 0.333
- Arenal-Volcano-1-Mush (PSP10059) — 0.337
- Bplus-ITW-WM (PSP10129) — 0.338
- Luminous-lucies-2-PS (PSP10032) — 0.340
- Luminous-lucies-1-PS (PSP10034) — 0.340
- Luminous-lucies-3-PS (PSP10033) — 0.340
- Treasure-Coast-2-Mush (PSP10082) — 0.340
- Treasure-coast-3-PS (PSP10056) — 0.342
- Treasure-coast-1-PS (PSP10054) — 0.343
- Treasure-coast-2-PS (PSP10055) — 0.343
Most Distant
- Bplus-3-PS (PSP10001) — 0.617
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.613
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.613
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.613
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.611
- Puerto-Rican-ITW (PSP10078) — 0.610
- Orissa-India-ITW (PSP10071) — 0.610
- Huautla-2-redo-SW (PSP10030) — 0.610
- Huautla-3-redo-SW (PSP10031) — 0.609
- Huautla-3-PS (PSP10005) — 0.609
- Gulf-Coast-BAF (PSP10090) — 0.608
- Gulf-Coast (PSP10091) — 0.608
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.608
- Bplus-2-redo-SW (PSP10015) — 0.607
- Bplus-1-redo-SW (PSP10014) — 0.606
- Bplus-3-redo-SW (PSP10016) — 0.606
- Ecuador-3-SW (PSP10025) — 0.606
- Maui-2-PS (PSP10041) — 0.606
- GoldenTeacher-3-SW (PSP10029) — 0.606
- Avery-Albino-ITW-WM (PSP10123) — 0.605
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
93f67d9c357b99fb
a5cad00ae91ae4bc 50522bca5cd4300d 162ca0e52cba432a - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
c044ed2ffa2d9efb8a049f67e17b6c8d c5e3b283bedd5f20 f85bb407b50239b4