Burma-1-SW
PSP 10020
DNA Source: SporeWorks
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- sporeworks.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 420
- No. of Contigs (>= 50K bp)
- 210
- Total Length (>= 25K bp)
- 30,040,168
- Total Length (>= 50K bp)
- 22,464,238
- Total Contigs
- 2,568
- Largest Contig
- 418,919
- Total Length
- 40,024,829
- GC (%)
- 46.14
- N50
- 61,653
Variants
PsiT1
5 variants
—
5 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Cambodian--1-PS (PSP10060) — 0.040
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.045
- Avery-Albino-ITW-WM (PSP10123) — 0.053
- Bplus-2-redo-SW (PSP10015) — 0.058
- Bplus-1-redo-SW (PSP10014) — 0.059
- Bplus-3-redo-SW (PSP10016) — 0.059
- Bplus (PSP10088) — 0.061
- Bplus-3-PS (PSP10001) — 0.062
- Maui-2-PS (PSP10041) — 0.064
- Orissa-India-ITW (PSP10071) — 0.064
- Maui-3-PS (PSP10042) — 0.065
- HUA-Early (PSP10092) — 0.065
- Maui-1-PS (PSP10040) — 0.065
- McKennaii-1-PS (PSP10069) — 0.066
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.067
- Huautla-3-PS (PSP10005) — 0.068
- GoldenTeacher-3-SW (PSP10029) — 0.068
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.068
- Huautla-3-redo-SW (PSP10031) — 0.069
- Ecuador-3-SW (PSP10025) — 0.069
Most Distant
- Penvy-1-PS (PSP10045) — 0.710
- Penvy-Col4-PS (PSP10043) — 0.710
- Penvy-Col5-PS (PSP10044) — 0.710
- Penvy-2-SW (PSP10075) — 0.709
- Costa-Rica-1-redo-SW (PSP10022) — 0.653
- Costa-Rica-2-redo-SW (PSP10023) — 0.651
- Treasure-coast-1-PS (PSP10054) — 0.647
- Treasure-coast-2-PS (PSP10055) — 0.647
- Treasure-coast-3-PS (PSP10056) — 0.647
- Treasure-Coast-2-Mush (PSP10082) — 0.646
- Costa-Rica-3-redo-SW (PSP10024) — 0.622
- Bplus-ITW-WM (PSP10129) — 0.611
- ColumbiaRust-1-SW (PSP10021) — 0.606
- Arenal-Volcano-1-Mush (PSP10059) — 0.606
- Orissa-India-1-Mush (PSP10072) — 0.605
- Orissa-India-4-Mush (PSP10073) — 0.605
- Luminous-lucies-2-PS (PSP10032) — 0.603
- Luminous-lucies-3-PS (PSP10033) — 0.602
- Luminous-lucies-1-PS (PSP10034) — 0.602
- Roatan-Honduras-4-Mush (PSP10079) — 0.601
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
3b4a41e73022ea07
09c4e0068e4ca242 5e3edb1616a96af0 2e566b37106d3c78 - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
bf84cc22813d35d1f4576637c05f6151 f39b1db77c1290aa ddbfcfb1aa5b042b