Chitwan-1-SW
PSP 10002
DNA Source: SporeWorks
General Information
- Accession Date
- May 31, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- sporeworks.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 374
- No. of Contigs (>= 50K bp)
- 149
- Total Length (>= 25K bp)
- 23,549,790
- Total Length (>= 50K bp)
- 15,773,293
- Total Contigs
- 12,608
- Largest Contig
- 529,686
- Total Length
- 48,284,473
- GC (%)
- 45.64
- N50
- 23,758
Variants
PsiR
1 variant
—
1 MODERATE
PsiR
MODERATE
p.Ala344Val
c.1031C>T
missense variant
G/A
CM039007.1:1655743
PsiT1
21 variants
—
1 HIGH 20 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Thr246Ile
c.737C>T
missense variant
C/T
CM039007.1:1664333
PsiT1
MODERATE
p.Arg266Ser
c.798A>T
missense variant
A/T
CM039007.1:1664394
PsiT1
MODERATE
p.Leu268Ile
c.802C>A
missense variant
C/A
CM039007.1:1664398
PsiT1
MODERATE
p.Thr386Ala
c.1156A>G
missense variant
A/G
CM039007.1:1664803
PsiT1
MODERATE
p.Ile505Val
c.1513A>G
missense variant
A/G
CM039007.1:1665277
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Met542Ile
c.1626G>A
missense variant
G/A
CM039007.1:1665570
PsiT1
MODERATE
p.Ile563Leu
c.1687A>C
missense variant
A/C
CM039007.1:1665631
PsiT1
MODERATE
p.Val564Ile
c.1690G>A
missense variant
G/A
CM039007.1:1665634
PsiT1
MODERATE
p.Asn572Asp
c.1714A>G
missense variant
A/G
CM039007.1:1665658
PsiT1
HIGH
c.1720+1G>T
c.1720+1G>T
splice donor variant & intron variant
G/T
CM039007.1:1665665
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg669Trp
c.2005C>T
missense variant
C/T
CM039007.1:1666373
PsiT1
MODERATE
p.Ser680Ala
c.2038T>G
missense variant
T/G
CM039007.1:1666406
PsiT1
MODERATE
p.Leu689Val
c.2065T>G
missense variant
T/G
CM039007.1:1666433
PsiT1
MODERATE
p.Glu746Gly
c.2237A>G
missense variant
A/G
CM039007.1:1666605
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiT1
MODERATE
p.Gln858Leu
c.2573A>T
missense variant
A/T
CM039007.1:1666941
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
1 variant
—
1 MODERATE
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Z-strain-1-Mush (PSP10083) — 0.323
- Arenal-Volcano-1-Mush (PSP10059) — 0.330
- Luminous-lucies-2-PS (PSP10032) — 0.331
- Luminous-lucies-3-PS (PSP10033) — 0.331
- Luminous-lucies-1-PS (PSP10034) — 0.331
- Roatan-Honduras-4-Mush (PSP10079) — 0.334
- Treasure-Coast-2-Mush (PSP10082) — 0.338
- ColumbiaRust-1-SW (PSP10021) — 0.338
- Costa-Rica-3-redo-SW (PSP10024) — 0.338
- Treasure-coast-3-PS (PSP10056) — 0.339
- Treasure-coast-2-PS (PSP10055) — 0.339
- Treasure-coast-1-PS (PSP10054) — 0.339
- Tosohatchee-print-ITW (PSP10081) — 0.340
- MGC_2016_unknown_strain (PSP10012) — 0.340
- Penvy-2-SW (PSP10075) — 0.349
- Penvy-Col5-PS (PSP10044) — 0.350
- Penvy-1-PS (PSP10045) — 0.350
- Penvy-Col4-PS (PSP10043) — 0.350
- Orissa-India-4-Mush (PSP10073) — 0.350
- Guapile-ITW-col-WM (PSP10132) — 0.351
Most Distant
- Bplus-3-PS (PSP10001) — 0.585
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.583
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.583
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.582
- Avery-Albino-ITW-WM (PSP10123) — 0.582
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.581
- Orissa-India-ITW (PSP10071) — 0.580
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.580
- Bplus (PSP10088) — 0.579
- HUA-Early (PSP10092) — 0.579
- Gulf-Coast-BAF (PSP10090) — 0.578
- Burma-1-SW (PSP10020) — 0.578
- Gulf-Coast (PSP10091) — 0.578
- McKennaii-1-PS (PSP10069) — 0.577
- Ecuador-3-SW (PSP10025) — 0.577
- GoldenCoast-UM (PSP10109) — 0.576
- Bplus-3-redo-SW (PSP10016) — 0.576
- Bplus-1-redo-SW (PSP10014) — 0.576
- Bplus-2-redo-SW (PSP10015) — 0.576
- GoldenTeacher-3-SW (PSP10029) — 0.576
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
fcdef402fb3fd807
5fa60871a74398df d53edb3abd925728 0abdb9cd346c25a3 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
443e8ba6c0ed518276dace50a2ce65d5 78bbf384148d9afc 1ee7c7f96813fcc1