Orissa-India-print-ITW
PSP 10074
DNA Source: Inoculate the World
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- inoculatetheworld.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 408
- No. of Contigs (>= 50K bp)
- 213
- Total Length (>= 25K bp)
- 30,470,530
- Total Length (>= 50K bp)
- 23,397,012
- Total Contigs
- 2,475
- Largest Contig
- 474,232
- Total Length
- 40,034,173
- GC (%)
- 46.13
- N50
- 65,726
Variants
PsiT1
5 variants
—
5 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Bplus (PSP10088) — 0.071
- Orissa-India-ITW (PSP10071) — 0.073
- HUA-Early (PSP10092) — 0.074
- McKennaii-1-PS (PSP10069) — 0.075
- Bplus-3-PS (PSP10001) — 0.075
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.078
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.078
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.081
- BplusONT-WM (PSP10141) — 0.083
- Bplus_Denver (PSP10010) — 0.084
- Avery-Albino-ITW-WM (PSP10123) — 0.088
- Bplus-2-redo-SW (PSP10015) — 0.088
- Bplus-1-redo-SW (PSP10014) — 0.089
- GoldenTeacher-3-SW (PSP10029) — 0.090
- Bplus-3-redo-SW (PSP10016) — 0.090
- Maui-2-PS (PSP10041) — 0.092
- Ecuador-3-SW (PSP10025) — 0.092
- Ecuador-3-PS (PSP10061) — 0.092
- Maui-3-PS (PSP10042) — 0.094
- Golden-Teacher (PSP10089) — 0.094
Most Distant
- Penvy-1-PS (PSP10045) — 0.705
- Penvy-Col5-PS (PSP10044) — 0.705
- Penvy-Col4-PS (PSP10043) — 0.705
- Penvy-2-SW (PSP10075) — 0.704
- Costa-Rica-1-redo-SW (PSP10022) — 0.649
- Costa-Rica-2-redo-SW (PSP10023) — 0.649
- Treasure-coast-1-PS (PSP10054) — 0.649
- Treasure-coast-2-PS (PSP10055) — 0.648
- Treasure-coast-3-PS (PSP10056) — 0.648
- Treasure-Coast-2-Mush (PSP10082) — 0.646
- Costa-Rica-3-redo-SW (PSP10024) — 0.621
- Bplus-ITW-WM (PSP10129) — 0.606
- Arenal-Volcano-1-Mush (PSP10059) — 0.606
- Luminous-lucies-2-PS (PSP10032) — 0.603
- Luminous-lucies-3-PS (PSP10033) — 0.602
- Luminous-lucies-1-PS (PSP10034) — 0.602
- Roatan-Honduras-4-Mush (PSP10079) — 0.596
- ColumbiaRust-1-SW (PSP10021) — 0.596
- Orissa-India-4-Mush (PSP10073) — 0.595
- Orissa-India-1-Mush (PSP10072) — 0.593
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
06e176f05b049917
4b298934afafacef e8baa0ff52b14c03 2d7395c4a38d7446 - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
65c142fa4b47f556916320a6585bef8c b70cb7290d579896 1eae09f1b99c8a62