Orissa-India-print-ITW
PSP 10074
DNA Source: Inoculate the World
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- inoculatetheworld.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 408
- No. of Contigs (>= 50K bp)
- 213
- Total Length (>= 25K bp)
- 30,470,530
- Total Length (>= 50K bp)
- 23,397,012
- Total Contigs
- 2,475
- Largest Contig
- 474,232
- Total Length
- 40,034,173
- GC (%)
- 46.13
- N50
- 65,726
Variants
PsiT1
5 variants
—
5 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Bplus (PSP10088) — 0.071
- Orissa-India-ITW (PSP10071) — 0.073
- HUA-Early (PSP10092) — 0.074
- McKennaii-1-PS (PSP10069) — 0.075
- Bplus-3-PS (PSP10001) — 0.075
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.078
- True-Albino-Teacher-ITW-WM (PSP10140) — 0.078
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.081
- BplusONT-WM (PSP10141) — 0.083
- Bplus_Denver (PSP10010) — 0.084
- Avery-Albino-ITW-WM (PSP10123) — 0.088
- Bplus-2-redo-SW (PSP10015) — 0.088
- Bplus-1-redo-SW (PSP10014) — 0.089
- GoldenTeacher-3-SW (PSP10029) — 0.090
- Bplus-3-redo-SW (PSP10016) — 0.090
- Maui-2-PS (PSP10041) — 0.092
- Ecuador-3-SW (PSP10025) — 0.092
- Ecuador-3-PS (PSP10061) — 0.092
- Maui-3-PS (PSP10042) — 0.094
- Golden-Teacher (PSP10089) — 0.094
Most Distant
- Penvy-1-PS (PSP10045) — 0.705
- Penvy-Col5-PS (PSP10044) — 0.705
- Penvy-Col4-PS (PSP10043) — 0.705
- Penvy-2-SW (PSP10075) — 0.704
- Costa-Rica-1-redo-SW (PSP10022) — 0.649
- Costa-Rica-2-redo-SW (PSP10023) — 0.649
- Treasure-coast-1-PS (PSP10054) — 0.649
- Treasure-coast-2-PS (PSP10055) — 0.648
- Treasure-coast-3-PS (PSP10056) — 0.648
- Treasure-Coast-2-Mush (PSP10082) — 0.646
- Costa-Rica-3-redo-SW (PSP10024) — 0.621
- Bplus-ITW-WM (PSP10129) — 0.606
- Arenal-Volcano-1-Mush (PSP10059) — 0.606
- Luminous-lucies-2-PS (PSP10032) — 0.603
- Luminous-lucies-3-PS (PSP10033) — 0.602
- Luminous-lucies-1-PS (PSP10034) — 0.602
- Roatan-Honduras-4-Mush (PSP10079) — 0.596
- ColumbiaRust-1-SW (PSP10021) — 0.596
- Orissa-India-4-Mush (PSP10073) — 0.595
- Orissa-India-1-Mush (PSP10072) — 0.593
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
06e176f05b049917
4b298934afafacef e8baa0ff52b14c03 2d7395c4a38d7446 - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
65c142fa4b47f556916320a6585bef8c b70cb7290d579896 1eae09f1b99c8a62