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Huautla-3-redo-SW

PSP 10031

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
403
No. of Contigs (>= 50K bp)
211
Total Length (>= 25K bp)
29,804,181
Total Length (>= 50K bp)
22,896,149
Total Contigs
3,323
Largest Contig
419,422
Total Length
40,606,517
GC (%)
46.12
N50
63,014

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Huautla-3-PS (PSP10005) — 0.020
  2. Huautla-2-redo-SW (PSP10030) — 0.025
  3. Maui-2-PS (PSP10041) — 0.030
  4. Maui-3-PS (PSP10042) — 0.032
  5. Maui-1-PS (PSP10040) — 0.033
  6. Golden-Teacher (PSP10089) — 0.035
  7. GoldenTeacher-3-SW (PSP10029) — 0.036
  8. Bplus-2-redo-SW (PSP10015) — 0.037
  9. Ecuador-3-SW (PSP10025) — 0.038
  10. Bplus-3-redo-SW (PSP10016) — 0.039
  11. Bplus-1-redo-SW (PSP10014) — 0.039
  12. Ecuador-3-PS (PSP10061) — 0.039
  13. Z-strain-3-PS (PSP10084) — 0.040
  14. PES-2-SW (PSP10008) — 0.042
  15. GoldenTeacher-2-SW (PSP10028) — 0.043
  16. GoldenTeacher-1-SW (PSP10027) — 0.044
  17. Puerto-Rican-ITW (PSP10078) — 0.047
  18. Bplus-3-PS (PSP10001) — 0.048
  19. GoldenCoast-BAF-A2-UM (PSP10106) — 0.050
  20. GoldenCoast-BAF-B1-UM (PSP10107) — 0.050

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.721
  2. Penvy-Col5-PS (PSP10044) — 0.721
  3. Penvy-Col4-PS (PSP10043) — 0.721
  4. Penvy-2-SW (PSP10075) — 0.720
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.667
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.662
  7. Treasure-coast-1-PS (PSP10054) — 0.648
  8. Treasure-coast-2-PS (PSP10055) — 0.647
  9. Treasure-coast-3-PS (PSP10056) — 0.647
  10. Treasure-Coast-2-Mush (PSP10082) — 0.646
  11. Costa-Rica-3-redo-SW (PSP10024) — 0.631
  12. Orissa-India-1-Mush (PSP10072) — 0.616
  13. Bplus-ITW-WM (PSP10129) — 0.615
  14. Orissa-India-4-Mush (PSP10073) — 0.609
  15. Arenal-Volcano-1-Mush (PSP10059) — 0.607
  16. ColumbiaRust-1-SW (PSP10021) — 0.605
  17. Luminous-lucies-2-PS (PSP10032) — 0.602
  18. Luminous-lucies-3-PS (PSP10033) — 0.602
  19. Luminous-lucies-1-PS (PSP10034) — 0.602
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.601

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
3d0647b3ae96804b862e0c75379ee0c6e5d2e61fc850d4f88c411ab8421e8ad8
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
539ef905b0d675001b81b515b44f9800a031ecb0252b81f29078cd071aa03f6a

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