Costa-Rica-1-redo-SW
PSP 10022
DNA Source: SporeWorks
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- sporeworks.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 0
- No. of Contigs (>= 50K bp)
- 0
- Total Length (>= 25K bp)
- 0
- Total Length (>= 50K bp)
- 0
- Total Contigs
- 410
- Largest Contig
- 9,161
- Total Length
- 375,614
- GC (%)
- 38.62
- N50
- 907
Variants
PsiT1
10 variants
—
1 HIGH 9 MODERATE
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Met542Ile
c.1626G>A
missense variant
G/A
CM039007.1:1665570
PsiT1
MODERATE
p.Asn572Asp
c.1714A>G
missense variant
A/G
CM039007.1:1665658
PsiT1
HIGH
c.1720+1G>T
c.1720+1G>T
splice donor variant & intron variant
G/T
CM039007.1:1665665
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Leu689Val
c.2065T>G
missense variant
T/G
CM039007.1:1666433
PsiT1
MODERATE
p.Glu746Gly
c.2237A>G
missense variant
A/G
CM039007.1:1666605
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiT1
MODERATE
p.Gln858Leu
c.2573A>T
missense variant
A/T
CM039007.1:1666941
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
Genetic Relatives
Nearest
- Costa-Rica-3-redo-SW (PSP10024) — 0.134
- Costa-Rica-2-redo-SW (PSP10023) — 0.140
- Costa-Rica-1-redo-SW (PSP10003) — 0.226
- Costa-Rica-2-redo-SW (PSP10004) — 0.239
- Penvy-Col5-PS (PSP10044) — 0.270
- Penvy-1-PS (PSP10045) — 0.270
- Penvy-2-SW (PSP10075) — 0.271
- Penvy-Col4-PS (PSP10043) — 0.271
- Roatan-Honduras-4-Mush (PSP10079) — 0.323
- Treasure-coast-1-PS (PSP10054) — 0.328
- Treasure-coast-3-PS (PSP10056) — 0.328
- Treasure-coast-2-PS (PSP10055) — 0.328
- Treasure-Coast-2-Mush (PSP10082) — 0.328
- ColumbiaRust-1-SW (PSP10021) — 0.331
- Orissa-India-4-Mush (PSP10073) — 0.331
- Arenal-Volcano-1-Mush (PSP10059) — 0.332
- Bplus-ITW-WM (PSP10129) — 0.332
- Luminous-lucies-2-PS (PSP10032) — 0.336
- Luminous-lucies-3-PS (PSP10033) — 0.337
- Luminous-lucies-1-PS (PSP10034) — 0.337
Most Distant
- Bplus-3-PS (PSP10001) — 0.669
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.668
- Maui-2-PS (PSP10041) — 0.668
- Huautla-3-PS (PSP10005) — 0.667
- GoldenCoast-BAF-B2-UM (PSP10108) — 0.667
- Huautla-3-redo-SW (PSP10031) — 0.667
- GoldenCoast-BAF-A1-UM (PSP10105) — 0.666
- Bplus-2-redo-SW (PSP10015) — 0.666
- Huautla-2-redo-SW (PSP10030) — 0.666
- Bplus-1-redo-SW (PSP10014) — 0.666
- Bplus-3-redo-SW (PSP10016) — 0.666
- Maui-3-PS (PSP10042) — 0.665
- GoldenTeacher-3-SW (PSP10029) — 0.665
- Puerto-Rican-ITW (PSP10078) — 0.665
- Maui-1-PS (PSP10040) — 0.665
- Ecuador-3-SW (PSP10025) — 0.665
- Orissa-India-ITW (PSP10071) — 0.665
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.665
- Golden-Teacher (PSP10089) — 0.662
- GoldenTeacher-1-SW (PSP10027) — 0.662
Sequence Data Downloads
Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.
Blockchain Registration Information
- Transaction ID
-
c23961a1d9c4c394
67d4f2e7600528ca 4283dd75c1014e6c 3d775e94af734c04 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
c97d9754aeff2793a86a7421ac16f16d 2a801071f524fb4c 5500550949a6e1ab