Costa-Rica-1-redo-SW
PSP 10022
DNA Source: SporeWorks
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- sporeworks.com
Genetic Information
File Downloads
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 0
- No. of Contigs (>= 50K bp)
- 0
- Total Length (>= 25K bp)
- 0
- Total Length (>= 50K bp)
- 0
- Total Contigs
- 410
- Largest Contig
- 9,161
- Total Length
- 375,614
- GC (%)
- 38.62
- N50
- 907
Variants
| PsiT1 | c.1616A>G | p.His539Arg | missense variant | moderate | CM039007.1 | 1665560 | A/G |
| PsiT1 | c.1626G>A | p.Met542Ile | missense variant | moderate | CM039007.1 | 1665570 | G/A |
| PsiT1 | c.1714A>G | p.Asn572Asp | missense variant | moderate | CM039007.1 | 1665658 | A/G |
| PsiT1 | c.1720+1G>T | splice donor variant & intron variant | high | CM039007.1 | 1665665 | G/T | |
| PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
| PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
| PsiT1 | c.2065T>G | p.Leu689Val | missense variant | moderate | CM039007.1 | 1666433 | T/G |
| PsiT1 | c.2237A>G | p.Glu746Gly | missense variant | moderate | CM039007.1 | 1666605 | A/G |
| PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
| PsiT1 | c.2573A>T | p.Gln858Leu | missense variant | moderate | CM039007.1 | 1666941 | A/T |
| PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
Nearest genetic relatives (All Samples)
0
0.092
0.183
0.275
0.367
- 0.134 Costa-Rica-3-redo-SW (PSP10024)
- 0.140 Costa-Rica-2-redo-SW (PSP10023)
- 0.226 Costa-Rica-1-redo-SW (PSP10003)
- 0.239 Costa-Rica-2-redo-SW (PSP10004)
- 0.270 Penvy-Col5-PS (PSP10044)
- 0.270 Penvy-1-PS (PSP10045)
- 0.271 Penvy-2-SW (PSP10075)
- 0.271 Penvy-Col4-PS (PSP10043)
- 0.323 Roatan-Honduras-4-Mush (PSP10079)
- 0.328 Treasure-coast-1-PS (PSP10054)
- 0.328 Treasure-coast-3-PS (PSP10056)
- 0.328 Treasure-coast-2-PS (PSP10055)
- 0.328 Treasure-Coast-2-Mush (PSP10082)
- 0.331 ColumbiaRust-1-SW (PSP10021)
- 0.331 Orissa-India-4-Mush (PSP10073)
- 0.332 Arenal-Volcano-1-Mush (PSP10059)
- 0.332 Bplus-ITW-WM (PSP10129)
- 0.336 Luminous-lucies-2-PS (PSP10032)
- 0.337 Luminous-lucies-3-PS (PSP10033)
- 0.337 Luminous-lucies-1-PS (PSP10034)
Most genetically distant strains (All Samples)
0
0.175
0.350
0.525
0.700
- 0.669 Bplus-3-PS (PSP10001)
- 0.668 GoldenCoast-BAF-B1-UM (PSP10107)
- 0.668 Maui-2-PS (PSP10041)
- 0.667 Huautla-3-PS (PSP10005)
- 0.667 GoldenCoast-BAF-B2-UM (PSP10108)
- 0.667 Huautla-3-redo-SW (PSP10031)
- 0.666 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.666 Bplus-2-redo-SW (PSP10015)
- 0.666 Huautla-2-redo-SW (PSP10030)
- 0.666 Bplus-1-redo-SW (PSP10014)
- 0.666 Bplus-3-redo-SW (PSP10016)
- 0.665 Maui-3-PS (PSP10042)
- 0.665 GoldenTeacher-3-SW (PSP10029)
- 0.665 Puerto-Rican-ITW (PSP10078)
- 0.665 Maui-1-PS (PSP10040)
- 0.665 Ecuador-3-SW (PSP10025)
- 0.665 Orissa-India-ITW (PSP10071)
- 0.665 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.662 Golden-Teacher (PSP10089)
- 0.662 GoldenTeacher-1-SW (PSP10027)
Blockchain Registration Information
- Transaction ID
-
c23961a1d9c4c394
67d4f2e7600528ca 4283dd75c1014e6c 3d775e94af734c04 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
c97d9754aeff2793a86a7421ac16f16d 2a801071f524fb4c 5500550949a6e1ab
