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Puerto-Rican-ITW

PSP 10078

DNA Source: Inoculate the World

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
501
No. of Contigs (>= 50K bp)
243
Total Length (>= 25K bp)
35,109,511
Total Length (>= 50K bp)
25,893,937
Total Contigs
2,697
Largest Contig
551,903
Total Length
45,806,543
GC (%)
49.04
N50
60,697

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. GoldenCoast-BAF-B2-UM (PSP10108) — 0.043
  2. Huautla-3-PS (PSP10005) — 0.043
  3. GoldenCoast-BAF-B1-UM (PSP10107) — 0.044
  4. Gulf-Coast (PSP10091) — 0.045
  5. Gulf-Coast-BAF (PSP10090) — 0.046
  6. Bplus-2-redo-SW (PSP10015) — 0.047
  7. Huautla-3-redo-SW (PSP10031) — 0.047
  8. Bplus-1-redo-SW (PSP10014) — 0.047
  9. Golden-Teacher (PSP10089) — 0.048
  10. Bplus-3-redo-SW (PSP10016) — 0.048
  11. Huautla-2-redo-SW (PSP10030) — 0.050
  12. Maui-2-PS (PSP10041) — 0.050
  13. Z-strain-3-PS (PSP10084) — 0.050
  14. Maui-1-PS (PSP10040) — 0.052
  15. Maui-3-PS (PSP10042) — 0.053
  16. GoldenCoast-BAF-A1-UM (PSP10105) — 0.053
  17. GoldenCoast-BAF-A2-UM (PSP10106) — 0.054
  18. Orissa-India-ITW (PSP10071) — 0.054
  19. GoldenTeacher-3-SW (PSP10029) — 0.055
  20. Ecuador-3-SW (PSP10025) — 0.056

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.718
  2. Penvy-Col5-PS (PSP10044) — 0.717
  3. Penvy-Col4-PS (PSP10043) — 0.717
  4. Penvy-2-SW (PSP10075) — 0.716
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.665
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.664
  7. Treasure-coast-1-PS (PSP10054) — 0.648
  8. Treasure-coast-2-PS (PSP10055) — 0.648
  9. Treasure-coast-3-PS (PSP10056) — 0.648
  10. Treasure-Coast-2-Mush (PSP10082) — 0.646
  11. Costa-Rica-3-redo-SW (PSP10024) — 0.635
  12. Bplus-ITW-WM (PSP10129) — 0.614
  13. Orissa-India-1-Mush (PSP10072) — 0.614
  14. Arenal-Volcano-1-Mush (PSP10059) — 0.612
  15. ColumbiaRust-1-SW (PSP10021) — 0.611
  16. Orissa-India-4-Mush (PSP10073) — 0.610
  17. Luminous-lucies-2-PS (PSP10032) — 0.609
  18. Luminous-lucies-3-PS (PSP10033) — 0.608
  19. Luminous-lucies-1-PS (PSP10034) — 0.608
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.605

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
096f9f1fbba3a129abf905eafa5b8ef8457e220bc429d7eac96afa645e8271ab
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
d054fa8631e4f1686d7d8d977493514f4ce47a204bbc948fb1ecae97edafb614

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