Advanced Strain Search

ColumbiaRust-1-SW

PSP 10021

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
406
No. of Contigs (>= 50K bp)
197
Total Length (>= 25K bp)
28,543,138
Total Length (>= 50K bp)
21,291,539
Total Contigs
3,285
Largest Contig
640,893
Total Length
40,716,188
GC (%)
46.09
N50
53,485

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 1 variant — 1 MODERATE
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. WFB-UM-WM (PSP10121) — 0.240
  2. WFB-UM (PSP10112) — 0.240
  3. Roatan-Honduras-4-Mush (PSP10079) — 0.314
  4. Arenal-Volcano-1-Mush (PSP10059) — 0.315
  5. Luminous-lucies-2-PS (PSP10032) — 0.316
  6. Luminous-lucies-3-PS (PSP10033) — 0.316
  7. Luminous-lucies-1-PS (PSP10034) — 0.316
  8. Costa-Rica-3-redo-SW (PSP10024) — 0.321
  9. Bplus-ITW-WM (PSP10129) — 0.324
  10. Guapile-ITW-col-WM (PSP10132) — 0.325
  11. Treasure-Coast-2-Mush (PSP10082) — 0.327
  12. Treasure-coast-3-PS (PSP10056) — 0.327
  13. Treasure-coast-2-PS (PSP10055) — 0.327
  14. Treasure-coast-1-PS (PSP10054) — 0.327
  15. Costa-Rica-1-redo-SW (PSP10022) — 0.331
  16. Penvy-Col5-PS (PSP10044) — 0.333
  17. Penvy-1-PS (PSP10045) — 0.333
  18. Penvy-Col4-PS (PSP10043) — 0.333
  19. Penvy-2-SW (PSP10075) — 0.333
  20. Costa-Rica-2-redo-SW (PSP10023) — 0.337

Most Distant

  1. Puerto-Rican-ITW (PSP10078) — 0.611
  2. Blue-Meanie-ITW-WM (PSP10128) — 0.610
  3. GoldenCoast-BAF-B1-UM (PSP10107) — 0.609
  4. Bplus-3-PS (PSP10001) — 0.609
  5. GoldenCoast-BAF-B2-UM (PSP10108) — 0.608
  6. GoldenCoast-BAF-A1-UM (PSP10105) — 0.607
  7. Gulf-Coast-BAF (PSP10090) — 0.607
  8. Huautla-2-redo-SW (PSP10030) — 0.607
  9. GoldenCoast-BAF-A2-UM (PSP10106) — 0.607
  10. Gulf-Coast (PSP10091) — 0.607
  11. Bplus-1-redo-SW (PSP10014) — 0.606
  12. True-Albino-Teacher-ITW-WM (PSP10140) — 0.606
  13. Bplus-2-redo-SW (PSP10015) — 0.606
  14. Bplus-3-redo-SW (PSP10016) — 0.606
  15. Burma-1-SW (PSP10020) — 0.606
  16. Cambodian--1-PS (PSP10060) — 0.605
  17. Bplus (PSP10088) — 0.605
  18. Huautla-3-PS (PSP10005) — 0.605
  19. Orissa-India-ITW (PSP10071) — 0.605
  20. Huautla-3-redo-SW (PSP10031) — 0.605

Sequence Data Downloads

Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.

Blockchain Registration Information

Transaction ID
b4f743fb38a1c8ea62ff86b7de2a895cca847d7313ad5574a8d07ba22bc7438a
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
25cfae81d6087d08790d0d1e23e2970582f2cd4547a03c5307d1f81e9d676c19

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