ColumbiaRust-1-SW
PSP 10021
DNA Source: SporeWorks
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- sporeworks.com
Genetic Information
File Downloads
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 406
- No. of Contigs (>= 50K bp)
- 197
- Total Length (>= 25K bp)
- 28,543,138
- Total Length (>= 50K bp)
- 21,291,539
- Total Contigs
- 3,285
- Largest Contig
- 640,893
- Total Length
- 40,716,188
- GC (%)
- 46.09
- N50
- 53,485
Variants
| PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
| PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
| PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
| PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
| PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
| PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
| PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
0
0.092
0.183
0.275
0.367
- 0.240 WFB-UM-WM (PSP10121)
- 0.240 WFB-UM (PSP10112)
- 0.314 Roatan-Honduras-4-Mush (PSP10079)
- 0.315 Arenal-Volcano-1-Mush (PSP10059)
- 0.316 Luminous-lucies-2-PS (PSP10032)
- 0.316 Luminous-lucies-3-PS (PSP10033)
- 0.316 Luminous-lucies-1-PS (PSP10034)
- 0.321 Costa-Rica-3-redo-SW (PSP10024)
- 0.324 Bplus-ITW-WM (PSP10129)
- 0.325 Guapile-ITW-col-WM (PSP10132)
- 0.327 Treasure-Coast-2-Mush (PSP10082)
- 0.327 Treasure-coast-3-PS (PSP10056)
- 0.327 Treasure-coast-2-PS (PSP10055)
- 0.327 Treasure-coast-1-PS (PSP10054)
- 0.331 Costa-Rica-1-redo-SW (PSP10022)
- 0.333 Penvy-Col5-PS (PSP10044)
- 0.333 Penvy-1-PS (PSP10045)
- 0.333 Penvy-Col4-PS (PSP10043)
- 0.333 Penvy-2-SW (PSP10075)
- 0.337 Costa-Rica-2-redo-SW (PSP10023)
Most genetically distant strains (All Samples)
0
0.158
0.317
0.475
0.633
- 0.611 Puerto-Rican-ITW (PSP10078)
- 0.610 Blue-Meanie-ITW-WM (PSP10128)
- 0.609 GoldenCoast-BAF-B1-UM (PSP10107)
- 0.609 Bplus-3-PS (PSP10001)
- 0.608 GoldenCoast-BAF-B2-UM (PSP10108)
- 0.607 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.607 Gulf-Coast-BAF (PSP10090)
- 0.607 Huautla-2-redo-SW (PSP10030)
- 0.607 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.607 Gulf-Coast (PSP10091)
- 0.606 Bplus-1-redo-SW (PSP10014)
- 0.606 True-Albino-Teacher-ITW-WM (PSP10140)
- 0.606 Bplus-2-redo-SW (PSP10015)
- 0.606 Bplus-3-redo-SW (PSP10016)
- 0.606 Burma-1-SW (PSP10020)
- 0.605 Cambodian--1-PS (PSP10060)
- 0.605 Bplus (PSP10088)
- 0.605 Huautla-3-PS (PSP10005)
- 0.605 Orissa-India-ITW (PSP10071)
- 0.605 Huautla-3-redo-SW (PSP10031)
Blockchain Registration Information
- Transaction ID
-
b4f743fb38a1c8ea
62ff86b7de2a895c ca847d7313ad5574 a8d07ba22bc7438a - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
25cfae81d6087d08790d0d1e23e29705 82f2cd4547a03c53 07d1f81e9d676c19
