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Huautla-2-redo-SW

PSP 10030

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
413
No. of Contigs (>= 50K bp)
205
Total Length (>= 25K bp)
29,427,228
Total Length (>= 50K bp)
21,987,865
Total Contigs
2,906
Largest Contig
361,127
Total Length
40,280,509
GC (%)
46.13
N50
58,514

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Huautla-3-redo-SW (PSP10031) — 0.025
  2. Huautla-3-PS (PSP10005) — 0.025
  3. Maui-2-PS (PSP10041) — 0.033
  4. Maui-3-PS (PSP10042) — 0.036
  5. Maui-1-PS (PSP10040) — 0.036
  6. Golden-Teacher (PSP10089) — 0.039
  7. GoldenTeacher-3-SW (PSP10029) — 0.039
  8. Ecuador-3-SW (PSP10025) — 0.040
  9. Bplus-2-redo-SW (PSP10015) — 0.041
  10. Bplus-1-redo-SW (PSP10014) — 0.042
  11. Bplus-3-redo-SW (PSP10016) — 0.043
  12. Ecuador-3-PS (PSP10061) — 0.043
  13. Z-strain-3-PS (PSP10084) — 0.044
  14. GoldenTeacher-2-SW (PSP10028) — 0.045
  15. PES-2-SW (PSP10008) — 0.046
  16. GoldenTeacher-1-SW (PSP10027) — 0.046
  17. Puerto-Rican-ITW (PSP10078) — 0.050
  18. GoldenCoast-BAF-A2-UM (PSP10106) — 0.052
  19. Bplus-3-PS (PSP10001) — 0.053
  20. GoldenCoast-BAF-B1-UM (PSP10107) — 0.053

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.721
  2. Penvy-Col5-PS (PSP10044) — 0.721
  3. Penvy-Col4-PS (PSP10043) — 0.721
  4. Penvy-2-SW (PSP10075) — 0.720
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.666
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.662
  7. Treasure-coast-1-PS (PSP10054) — 0.650
  8. Treasure-coast-2-PS (PSP10055) — 0.649
  9. Treasure-coast-3-PS (PSP10056) — 0.649
  10. Treasure-Coast-2-Mush (PSP10082) — 0.648
  11. Costa-Rica-3-redo-SW (PSP10024) — 0.631
  12. Bplus-ITW-WM (PSP10129) — 0.617
  13. Orissa-India-1-Mush (PSP10072) — 0.616
  14. Orissa-India-4-Mush (PSP10073) — 0.610
  15. Arenal-Volcano-1-Mush (PSP10059) — 0.608
  16. ColumbiaRust-1-SW (PSP10021) — 0.607
  17. Luminous-lucies-3-PS (PSP10033) — 0.603
  18. Luminous-lucies-2-PS (PSP10032) — 0.603
  19. Luminous-lucies-1-PS (PSP10034) — 0.603
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.603

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
6b7980d99863221494563edc4289b6dd4e35112ca8bb36091ef54b2ef8037490
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
fa339ec7ef7e42aadcfc083fd939e391a044453fbff26c0aa03eaeb6abb9955b

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