Huautla-3-PS
PSP 10005
DNA Source: Premium Spores
General Information
- Accession Date
- May 31, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 407
- No. of Contigs (>= 50K bp)
- 202
- Total Length (>= 25K bp)
- 30,468,320
- Total Length (>= 50K bp)
- 23,155,451
- Total Contigs
- 3,631
- Largest Contig
- 475,741
- Total Length
- 40,943,267
- GC (%)
- 46
- N50
- 64,734
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.020 Huautla-3-redo-SW (PSP10031)
- 0.025 Huautla-2-redo-SW (PSP10030)
- 0.028 Maui-2-PS (PSP10041)
- 0.031 Golden-Teacher (PSP10089)
- 0.031 Maui-3-PS (PSP10042)
- 0.032 Maui-1-PS (PSP10040)
- 0.034 GoldenTeacher-3-SW (PSP10029)
- 0.036 Ecuador-3-SW (PSP10025)
- 0.037 Bplus-2-redo-SW (PSP10015)
- 0.037 Ecuador-3-PS (PSP10061)
- 0.037 Z-strain-3-PS (PSP10084)
- 0.038 PES-2-SW (PSP10008)
- 0.039 Bplus-1-redo-SW (PSP10014)
- 0.039 Bplus-3-redo-SW (PSP10016)
- 0.042 GoldenTeacher-2-SW (PSP10028)
- 0.043 GoldenTeacher-1-SW (PSP10027)
- 0.043 Puerto-Rican-ITW (PSP10078)
- 0.046 Bplus-3-PS (PSP10001)
- 0.047 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.047 Orissa-India-ITW (PSP10071)
Most genetically distant strains (All Samples)
- 0.722 Penvy-1-PS (PSP10045)
- 0.722 Penvy-Col5-PS (PSP10044)
- 0.722 Penvy-Col4-PS (PSP10043)
- 0.721 Penvy-2-SW (PSP10075)
- 0.667 Costa-Rica-1-redo-SW (PSP10022)
- 0.664 Costa-Rica-2-redo-SW (PSP10023)
- 0.648 Treasure-coast-1-PS (PSP10054)
- 0.647 Treasure-coast-3-PS (PSP10056)
- 0.647 Treasure-coast-2-PS (PSP10055)
- 0.645 Treasure-Coast-2-Mush (PSP10082)
- 0.632 Costa-Rica-3-redo-SW (PSP10024)
- 0.616 Orissa-India-1-Mush (PSP10072)
- 0.615 Bplus-ITW-WM (PSP10129)
- 0.609 Orissa-India-4-Mush (PSP10073)
- 0.606 Arenal-Volcano-1-Mush (PSP10059)
- 0.605 ColumbiaRust-1-SW (PSP10021)
- 0.602 Luminous-lucies-2-PS (PSP10032)
- 0.601 Luminous-lucies-1-PS (PSP10034)
- 0.601 Luminous-lucies-3-PS (PSP10033)
- 0.600 Roatan-Honduras-4-Mush (PSP10079)
Blockchain Registration Information
- Transaction ID
-
08c798401ead8c02
89c77fab82c5e1cd ce0cc7fb547d2dc3 0bf8da846ed6dabd - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
44fc4267bc137d5b
64ecbcfeb79a70d6 7f27afcb515f513b 4ec9714efb07c0f6