Pink-Buffalo-2-PS
PSP 10046
DNA Source: Premium Spores
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 425
- No. of Contigs (>= 50K bp)
- 205
- Total Length (>= 25K bp)
- 29,696,317
- Total Length (>= 50K bp)
- 22,155,181
- Total Contigs
- 5,494
- Largest Contig
- 466,093
- Total Length
- 45,883,678
- GC (%)
- 44.68
- N50
- 46,928
Variants
PsiR | c.551G>A | p.Arg184His | missense variant | moderate | CM039007.1 | 1656281 | C/T |
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.374 Roatan-Honduras-4-Mush (PSP10079)
- 0.382 Treasure-Coast-2-Mush (PSP10082)
- 0.383 Treasure-coast-3-PS (PSP10056)
- 0.383 Treasure-coast-1-PS (PSP10054)
- 0.383 Treasure-coast-2-PS (PSP10055)
- 0.385 Bplus-ITW-WM (PSP10129)
- 0.385 Luminous-lucies-1-PS (PSP10034)
- 0.385 Luminous-lucies-3-PS (PSP10033)
- 0.386 Luminous-lucies-2-PS (PSP10032)
- 0.386 Arenal-Volcano-1-Mush (PSP10059)
- 0.393 MGC 2016 unknown strain (PSP10012)
- 0.393 ColumbiaRust-1-SW (PSP10021)
- 0.393 Tosohatchee-print-ITW (PSP10081)
- 0.396 Z-strain-1-Mush (PSP10083)
- 0.400 Chitwan-1-SW (PSP10002)
- 0.402 Escondido-Mexico-1-Mush (PSP10062)
- 0.402 WFB-UM (PSP10112)
- 0.402 Costa-Rica-3-redo-SW (PSP10024)
- 0.403 Guapile-ITW-col-WM (PSP10132)
- 0.405 WFB-UM-WM (PSP10121)
Most genetically distant strains (All Samples)
- 0.523 Bplus-3-PS (PSP10001)
- 0.519 Orissa-India-ITW (PSP10071)
- 0.518 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.517 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.517 McKennaii-1-PS (PSP10069)
- 0.516 Bplus (PSP10088)
- 0.516 HUA-Early (PSP10092)
- 0.515 Bplus-1-redo-SW (PSP10014)
- 0.515 Bplus-2-redo-SW (PSP10015)
- 0.515 Bplus-3-redo-SW (PSP10016)
- 0.514 Huautla-2-redo-SW (PSP10030)
- 0.513 Huautla-3-redo-SW (PSP10031)
- 0.512 Huautla-3-PS (PSP10005)
- 0.512 Blue-Meanie-ITW-WM (PSP10128)
- 0.511 Burma-1-SW (PSP10020)
- 0.508 Maui-1-PS (PSP10040)
- 0.508 Maui-2-PS (PSP10041)
- 0.508 Puerto-Rican-ITW (PSP10078)
- 0.508 Maui-3-PS (PSP10042)
- 0.508 Orissa-India-print-ITW (PSP10074)
Blockchain Registration Information
- Transaction ID
-
380e980281502c36
d61d451464e8a4de 881595df2d37c5e2 acac8d11e1991e67 - Stamping Certificate
- Download PDF (39.8 KB)
- SHASUM Hash
-
ed9f560e93f6ce6f
239243b38c831ac1 7502abe60ac8b5ca 8602b052df59e10e