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Escondido-Mexico-1-Mush

PSP 10062

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
416
No. of Contigs (>= 50K bp)
200
Total Length (>= 25K bp)
29,467,093
Total Length (>= 50K bp)
21,862,534
Total Contigs
3,638
Largest Contig
522,662
Total Length
40,884,078
GC (%)
46.06
N50
55,190

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. APlusPlus-Leucistic-ITW (PSP10058) — 0.272
  2. Leucistic_GT1-ITW (PSP10066) — 0.350
  3. Leucistic_GT2-ITW (PSP10067) — 0.358
  4. MGC_2016_unknown_strain (PSP10012) — 0.379
  5. Orissa-India-4-Mush (PSP10073) — 0.380
  6. Z-strain-1-Mush (PSP10083) — 0.380
  7. Mexican_Dutch_King-1-PS (PSP10070) — 0.383
  8. Orissa-India-1-Mush (PSP10072) — 0.387
  9. Aplusplus (PSP10085) — 0.395
  10. Leucistic-Ecuador-ITW (PSP10065) — 0.396
  11. AAplus-4-Mush (PSP10057) — 0.396
  12. Albino-Aplus-3-PS (PSP10000) — 0.397
  13. Golden-Teacher_Denver (PSP10011) — 0.397
  14. Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.399
  15. Leucistic-Ecuador-ITW-WM (PSP10133) — 0.401
  16. Pink-Buffalo-2-PS (PSP10046) — 0.402
  17. Albino-Aplus-1-SW (PSP10013) — 0.403
  18. BM1-UM-WM (PSP10124) — 0.404
  19. BM2-UM-WM (PSP10126) — 0.407
  20. Thailand-Koh-Samui-1-Mush (PSP10080) — 0.407

Most Distant

  1. WFB-UM-WM (PSP10121) — 0.500
  2. WFB-UM (PSP10112) — 0.497
  3. Mazatapec-2-SW (PSP10006) — 0.484
  4. Mazatapec-cube-1-Mush (PSP10068) — 0.482
  5. Malabar-1-PS (PSP10037) — 0.477
  6. Malabar-2-SW (PSP10035) — 0.477
  7. Malabar-3-SW (PSP10036) — 0.476
  8. Malabar-3-PS (PSP10039) — 0.476
  9. Malabar-2-PS (PSP10038) — 0.476
  10. Mazatapec (PSP10093) — 0.474
  11. Burma-1-SW (PSP10020) — 0.470
  12. Avery-Albino-ITW-WM (PSP10123) — 0.470
  13. Cambodian--1-PS (PSP10060) — 0.470
  14. True-Albino-Teacher-ITW-WM (PSP10140) — 0.463
  15. Samui-1-redo-PS (PSP10047) — 0.461
  16. BM1b-UM-WM (PSP10125) — 0.461
  17. Samui-2-redo-PS (PSP10049) — 0.459
  18. Costa-Rica-2-redo-SW (PSP10023) — 0.459
  19. GoldenCoast-UM (PSP10109) — 0.458
  20. Treasure-coast-2-PS (PSP10055) — 0.457

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
091345f25621a3b8dbffae2902d7d04ff589a9999ff2b1118d61d9dd7569307b
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
d28f08261de2beb6d04174822e1c8099fd2af73736fdaf582298e7a61f165197

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