Z-strain-3-PS
PSP 10084
DNA Source: Premium Spores
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 412
- No. of Contigs (>= 50K bp)
- 211
- Total Length (>= 25K bp)
- 30,192,160
- Total Length (>= 50K bp)
- 22,923,469
- Total Contigs
- 2,850
- Largest Contig
- 460,654
- Total Length
- 40,245,967
- GC (%)
- 46.07
- N50
- 63,221
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.668C>G | p.Ser223* | stop gained | high | CM039007.1 | 1664264 | C/G |
PsiT1 | c.1424T>A | p.Val475Asp | missense variant | moderate | CM039007.1 | 1665132 | T/A |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.608G>A | p.Gly203Glu | missense variant | moderate | CM039007.1 | 1674063 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.033 Golden-Teacher (PSP10089)
- 0.037 GoldenTeacher-3-SW (PSP10029)
- 0.037 Huautla-3-PS (PSP10005)
- 0.038 Maui-2-PS (PSP10041)
- 0.039 Ecuador-3-PS (PSP10061)
- 0.040 Ecuador-3-SW (PSP10025)
- 0.040 Maui-3-PS (PSP10042)
- 0.040 Huautla-3-redo-SW (PSP10031)
- 0.040 GoldenCoast-BAF-B1-UM (PSP10107)
- 0.041 Maui-1-PS (PSP10040)
- 0.041 GoldenCoast-BAF-B2-UM (PSP10108)
- 0.042 Gulf-Coast (PSP10091)
- 0.044 Gulf-Coast-BAF (PSP10090)
- 0.044 Huautla-2-redo-SW (PSP10030)
- 0.045 GoldenTeacher-2-SW (PSP10028)
- 0.045 GoldenTeacher-1-SW (PSP10027)
- 0.046 Bplus-2-redo-SW (PSP10015)
- 0.047 PES-2-SW (PSP10008)
- 0.048 Bplus-1-redo-SW (PSP10014)
- 0.049 Bplus-3-redo-SW (PSP10016)
Most genetically distant strains (All Samples)
- 0.715 Penvy-1-PS (PSP10045)
- 0.715 Penvy-Col5-PS (PSP10044)
- 0.714 Penvy-Col4-PS (PSP10043)
- 0.713 Penvy-2-SW (PSP10075)
- 0.662 Costa-Rica-1-redo-SW (PSP10022)
- 0.658 Costa-Rica-2-redo-SW (PSP10023)
- 0.647 Treasure-coast-1-PS (PSP10054)
- 0.647 Treasure-coast-2-PS (PSP10055)
- 0.647 Treasure-coast-3-PS (PSP10056)
- 0.644 Treasure-Coast-2-Mush (PSP10082)
- 0.627 Costa-Rica-3-redo-SW (PSP10024)
- 0.614 Bplus-ITW-WM (PSP10129)
- 0.605 Orissa-India-1-Mush (PSP10072)
- 0.602 Arenal-Volcano-1-Mush (PSP10059)
- 0.600 Orissa-India-4-Mush (PSP10073)
- 0.599 ColumbiaRust-1-SW (PSP10021)
- 0.598 Luminous-lucies-2-PS (PSP10032)
- 0.598 Luminous-lucies-3-PS (PSP10033)
- 0.598 Luminous-lucies-1-PS (PSP10034)
- 0.596 Roatan-Honduras-4-Mush (PSP10079)
Blockchain Registration Information
- Transaction ID
-
81dab4af48120f22
db88e48121b95f7b 726724beb02bf75a a2a6da0bf122ce93 - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
4f21be49c0164ebe
ba0792bedc00fa84 c05174618245aa0a f703b1013c2abf89