Ecuador-3-PS
PSP 10061
DNA Source: Premium Spores
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 406
- No. of Contigs (>= 50K bp)
- 206
- Total Length (>= 25K bp)
- 30,000,261
- Total Length (>= 50K bp)
- 22,791,925
- Total Contigs
- 3,255
- Largest Contig
- 475,594
- Total Length
- 40,547,830
- GC (%)
- 46.06
- N50
- 64,299
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
PsiD | c.5A>G | p.Gln2Arg | missense variant | moderate | CM039007.1 | 1677603 | T/C |
Nearest genetic relatives (All Samples)
- 0.030 GoldenTeacher-3-SW (PSP10029)
- 0.030 Maui-2-PS (PSP10041)
- 0.031 Ecuador-3-SW (PSP10025)
- 0.032 Maui-3-PS (PSP10042)
- 0.033 Maui-1-PS (PSP10040)
- 0.034 Golden-Teacher (PSP10089)
- 0.037 Huautla-3-PS (PSP10005)
- 0.038 GoldenTeacher-2-SW (PSP10028)
- 0.038 GoldenTeacher-1-SW (PSP10027)
- 0.039 Z-strain-3-PS (PSP10084)
- 0.039 Bplus-2-redo-SW (PSP10015)
- 0.039 PES-2-SW (PSP10008)
- 0.039 Huautla-3-redo-SW (PSP10031)
- 0.040 Bplus-1-redo-SW (PSP10014)
- 0.040 Bplus-3-redo-SW (PSP10016)
- 0.043 Huautla-2-redo-SW (PSP10030)
- 0.049 Orissa-India-ITW (PSP10071)
- 0.050 McKennaii-1-PS (PSP10069)
- 0.051 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.051 Bplus-3-PS (PSP10001)
Most genetically distant strains (All Samples)
- 0.712 Penvy-1-PS (PSP10045)
- 0.712 Penvy-Col5-PS (PSP10044)
- 0.712 Penvy-Col4-PS (PSP10043)
- 0.711 Penvy-2-SW (PSP10075)
- 0.660 Costa-Rica-1-redo-SW (PSP10022)
- 0.658 Costa-Rica-2-redo-SW (PSP10023)
- 0.644 Treasure-coast-1-PS (PSP10054)
- 0.644 Treasure-coast-2-PS (PSP10055)
- 0.643 Treasure-coast-3-PS (PSP10056)
- 0.641 Treasure-Coast-2-Mush (PSP10082)
- 0.626 Costa-Rica-3-redo-SW (PSP10024)
- 0.612 Bplus-ITW-WM (PSP10129)
- 0.603 Orissa-India-1-Mush (PSP10072)
- 0.600 Arenal-Volcano-1-Mush (PSP10059)
- 0.597 ColumbiaRust-1-SW (PSP10021)
- 0.597 Orissa-India-4-Mush (PSP10073)
- 0.595 Luminous-lucies-2-PS (PSP10032)
- 0.595 Luminous-lucies-3-PS (PSP10033)
- 0.595 Luminous-lucies-1-PS (PSP10034)
- 0.594 Roatan-Honduras-4-Mush (PSP10079)
Blockchain Registration Information
- Transaction ID
-
7fc7091f68dc8792
8fee71a8d371ad56 e8fd262a0b3474da 3b7bcac3d0c6afb0 - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
99bae31f5a1aadce
9adc7fc0e3cf4a1d d98168a8f684449d 1676144c26cb611a