GoldenTeacher-1-SW
PSP 10027
DNA Source: SporeWorks
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- sporeworks.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 410
- No. of Contigs (>= 50K bp)
- 206
- Total Length (>= 25K bp)
- 29,522,313
- Total Length (>= 50K bp)
- 22,284,829
- Total Contigs
- 2,727
- Largest Contig
- 475,716
- Total Length
- 40,054,479
- GC (%)
- 46.13
- N50
- 60,969
Variants
PsiT1
5 variants
—
5 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- GoldenTeacher-3-SW (PSP10029) — 0.033
- Ecuador-3-SW (PSP10025) — 0.034
- Maui-2-PS (PSP10041) — 0.034
- Maui-3-PS (PSP10042) — 0.036
- Maui-1-PS (PSP10040) — 0.036
- Ecuador-3-PS (PSP10061) — 0.038
- GoldenTeacher-2-SW (PSP10028) — 0.039
- Golden-Teacher (PSP10089) — 0.040
- Bplus-2-redo-SW (PSP10015) — 0.042
- Bplus-1-redo-SW (PSP10014) — 0.042
- Huautla-3-PS (PSP10005) — 0.043
- Bplus-3-redo-SW (PSP10016) — 0.043
- Huautla-3-redo-SW (PSP10031) — 0.044
- Z-strain-3-PS (PSP10084) — 0.045
- PES-2-SW (PSP10008) — 0.046
- Huautla-2-redo-SW (PSP10030) — 0.046
- Bplus-3-PS (PSP10001) — 0.055
- GoldenCoast-BAF-A2-UM (PSP10106) — 0.055
- GoldenCoast-BAF-B1-UM (PSP10107) — 0.056
- Orissa-India-ITW (PSP10071) — 0.056
Most Distant
- Penvy-1-PS (PSP10045) — 0.714
- Penvy-Col5-PS (PSP10044) — 0.714
- Penvy-Col4-PS (PSP10043) — 0.714
- Penvy-2-SW (PSP10075) — 0.713
- Costa-Rica-1-redo-SW (PSP10022) — 0.662
- Costa-Rica-2-redo-SW (PSP10023) — 0.658
- Treasure-coast-1-PS (PSP10054) — 0.647
- Treasure-coast-2-PS (PSP10055) — 0.646
- Treasure-coast-3-PS (PSP10056) — 0.646
- Treasure-Coast-2-Mush (PSP10082) — 0.645
- Costa-Rica-3-redo-SW (PSP10024) — 0.627
- Bplus-ITW-WM (PSP10129) — 0.614
- Orissa-India-1-Mush (PSP10072) — 0.606
- Arenal-Volcano-1-Mush (PSP10059) — 0.603
- Orissa-India-4-Mush (PSP10073) — 0.600
- ColumbiaRust-1-SW (PSP10021) — 0.599
- Luminous-lucies-2-PS (PSP10032) — 0.599
- Luminous-lucies-1-PS (PSP10034) — 0.598
- Luminous-lucies-3-PS (PSP10033) — 0.598
- Roatan-Honduras-4-Mush (PSP10079) — 0.597
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
19143799db148a4d
b322c82ca752c6be 399da9ac42398014 6234b1c5af5dd3e6 - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
a756a35420749a1dd1a463139a5442ee f47f1c9838e82107 137082936457542d