Advanced Strain Search

Malabar-2-PS

PSP 10038

DNA Source: Premium Spores

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
premiumspores.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
398
No. of Contigs (>= 50K bp)
198
Total Length (>= 25K bp)
28,960,230
Total Length (>= 50K bp)
21,854,013
Total Contigs
3,959
Largest Contig
473,540
Total Length
41,369,839
GC (%)
46.12
N50
54,249

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Malabar-3-PS (PSP10039) — 0.014
  2. Malabar-1-PS (PSP10037) — 0.015
  3. Malabar-2-SW (PSP10035) — 0.015
  4. Malabar-3-SW (PSP10036) — 0.017
  5. Mazatapec-2-SW (PSP10006) — 0.048
  6. Mazatapec-cube-1-Mush (PSP10068) — 0.063
  7. WFB-UM (PSP10112) — 0.274
  8. WFB-UM-WM (PSP10121) — 0.274
  9. BM1b-UM-WM (PSP10125) — 0.323
  10. Mazatapec (PSP10093) — 0.324
  11. BM1-UM (PSP10098) — 0.347
  12. BM16 (PSP10087) — 0.359
  13. Samui-2-PS (PSP10048) — 0.381
  14. Orissa-India-print-ITW (PSP10074) — 0.392
  15. GoldenTeacher-1-SW (PSP10027) — 0.404
  16. PES-2-SW (PSP10008) — 0.406
  17. Thailand-Koh-Samui-1-Mush (PSP10080) — 0.408
  18. KOH-Samui-1-ITW (PSP10063) — 0.408
  19. Maui-2-PS (PSP10041) — 0.409
  20. Ecuador-3-PS (PSP10061) — 0.409

Most Distant

  1. Albino-Aplus-1-SW (PSP10013) — 0.508
  2. Aplusplus (PSP10085) — 0.502
  3. Penvy-Col5-PS (PSP10044) — 0.501
  4. Penvy-1-PS (PSP10045) — 0.501
  5. Penvy-Col4-PS (PSP10043) — 0.501
  6. Penvy-2-SW (PSP10075) — 0.501
  7. Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.495
  8. Costa-Rica-1-redo-SW (PSP10022) — 0.493
  9. Costa-Rica-2-redo-SW (PSP10023) — 0.487
  10. AAplus-4-Mush (PSP10057) — 0.487
  11. Albino-Aplus-3-PS (PSP10000) — 0.487
  12. Leucistic_GT2-ITW (PSP10067) — 0.486
  13. Orissa-India-1-Mush (PSP10072) — 0.486
  14. Escondido-Mexico-1-Mush (PSP10062) — 0.476
  15. Leucistic_GT1-ITW (PSP10066) — 0.473
  16. Costa-Rica-3-redo-SW (PSP10024) — 0.466
  17. Amazon-ITW-WM (PSP10122) — 0.465
  18. Costa-Rica-1-redo-SW (PSP10003) — 0.463
  19. APlusPlus-Leucistic-ITW (PSP10058) — 0.463
  20. Orissa-India-4-Mush (PSP10073) — 0.462

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
2d05daf33d495f673770d8e39ad2bfbd78dd2f013184a1271643729611ca4793
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
acbe2e5b6e5b3385ff524e66876d1d4d72dd6ff4f45b61a84268f79e10773904

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