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Leucistic_GT2-ITW

PSP 10067

DNA Source: Inoculate the World

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
inoculatetheworld.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
405
No. of Contigs (>= 50K bp)
197
Total Length (>= 25K bp)
29,794,286
Total Length (>= 50K bp)
22,327,957
Total Contigs
5,046
Largest Contig
441,643
Total Length
41,900,963
GC (%)
47.18
N50
55,770

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Leucistic_GT1-ITW (PSP10066) — 0.061
  2. Aplusplus (PSP10085) — 0.242
  3. Albino-Aplus-3-PS (PSP10000) — 0.246
  4. AAplus-4-Mush (PSP10057) — 0.247
  5. Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.248
  6. Albino-Aplus-1-SW (PSP10013) — 0.258
  7. Amazon-ITW-WM (PSP10122) — 0.316
  8. Blue-Meanie-ITW-WM (PSP10128) — 0.346
  9. Blue-Magnolia-Rust-UM-WM (PSP10127) — 0.357
  10. Escondido-Mexico-1-Mush (PSP10062) — 0.358
  11. Leucistic-Ecuador-ITW (PSP10065) — 0.368
  12. Bplus_Denver (PSP10010) — 0.371
  13. APlusPlus-Leucistic-ITW (PSP10058) — 0.372
  14. BplusONT-WM (PSP10141) — 0.374
  15. Leucistic-Ecuador-ITW-WM (PSP10133) — 0.375
  16. Gulf-Coast-BAF (PSP10090) — 0.382
  17. Gulf-Coast (PSP10091) — 0.382
  18. Huautla-3-PS (PSP10005) — 0.382
  19. GoldenCoast-BAF-B2-UM (PSP10108) — 0.383
  20. GoldenCoast-BAF-B1-UM (PSP10107) — 0.383

Most Distant

  1. Samui-1-redo-PS (PSP10047) — 0.525
  2. Samui-2-redo-PS (PSP10049) — 0.517
  3. Costa-Rica-1-redo-SW (PSP10022) — 0.509
  4. Costa-Rica-2-redo-SW (PSP10023) — 0.508
  5. WFB-UM-WM (PSP10121) — 0.500
  6. ColumbiaRust-1-SW (PSP10021) — 0.497
  7. WFB-UM (PSP10112) — 0.497
  8. Penvy-Col4-PS (PSP10043) — 0.496
  9. Penvy-1-PS (PSP10045) — 0.496
  10. Penvy-Col5-PS (PSP10044) — 0.496
  11. Mazatapec-cube-1-Mush (PSP10068) — 0.496
  12. Mazatapec-2-SW (PSP10006) — 0.496
  13. Penvy-2-SW (PSP10075) — 0.495
  14. Costa-Rica-3-redo-SW (PSP10024) — 0.493
  15. Samui-2-PS (PSP10048) — 0.489
  16. Malabar-3-SW (PSP10036) — 0.487
  17. Malabar-1-PS (PSP10037) — 0.486
  18. Malabar-2-SW (PSP10035) — 0.486
  19. Malabar-2-PS (PSP10038) — 0.486
  20. Malabar-3-PS (PSP10039) — 0.486

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
d17d2a723c35b5bee88cea828a5a7c35051b1efd6f093e649bfe19deb074cc28
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
e02e1342e83b9e9c807244eaa5b3d129d9c7a9976edcd1e4b238a3f21823aa63

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