Advanced Strain Search

Malabar-1-PS

PSP 10037

DNA Source: Premium Spores

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
premiumspores.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
402
No. of Contigs (>= 50K bp)
191
Total Length (>= 25K bp)
29,054,356
Total Length (>= 50K bp)
21,656,545
Total Contigs
3,806
Largest Contig
476,407
Total Length
41,258,174
GC (%)
46.14
N50
55,141

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Malabar-3-PS (PSP10039) — 0.015
  2. Malabar-2-PS (PSP10038) — 0.015
  3. Malabar-2-SW (PSP10035) — 0.015
  4. Malabar-3-SW (PSP10036) — 0.016
  5. Mazatapec-2-SW (PSP10006) — 0.049
  6. Mazatapec-cube-1-Mush (PSP10068) — 0.063
  7. WFB-UM-WM (PSP10121) — 0.274
  8. WFB-UM (PSP10112) — 0.274
  9. BM1b-UM-WM (PSP10125) — 0.322
  10. Mazatapec (PSP10093) — 0.324
  11. BM1-UM (PSP10098) — 0.347
  12. BM16 (PSP10087) — 0.358
  13. Samui-2-PS (PSP10048) — 0.381
  14. Orissa-India-print-ITW (PSP10074) — 0.392
  15. GoldenTeacher-1-SW (PSP10027) — 0.404
  16. PES-2-SW (PSP10008) — 0.406
  17. KOH-Samui-1-ITW (PSP10063) — 0.408
  18. Thailand-Koh-Samui-1-Mush (PSP10080) — 0.408
  19. Maui-2-PS (PSP10041) — 0.409
  20. Ecuador-3-PS (PSP10061) — 0.409

Most Distant

  1. Albino-Aplus-1-SW (PSP10013) — 0.508
  2. Penvy-Col5-PS (PSP10044) — 0.503
  3. Penvy-1-PS (PSP10045) — 0.503
  4. Penvy-Col4-PS (PSP10043) — 0.502
  5. Penvy-2-SW (PSP10075) — 0.502
  6. Aplusplus (PSP10085) — 0.502
  7. Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.495
  8. Costa-Rica-1-redo-SW (PSP10022) — 0.494
  9. Costa-Rica-2-redo-SW (PSP10023) — 0.487
  10. AAplus-4-Mush (PSP10057) — 0.487
  11. Leucistic_GT2-ITW (PSP10067) — 0.486
  12. Albino-Aplus-3-PS (PSP10000) — 0.486
  13. Orissa-India-1-Mush (PSP10072) — 0.486
  14. Escondido-Mexico-1-Mush (PSP10062) — 0.477
  15. Leucistic_GT1-ITW (PSP10066) — 0.473
  16. Costa-Rica-3-redo-SW (PSP10024) — 0.466
  17. Amazon-ITW-WM (PSP10122) — 0.465
  18. Costa-Rica-1-redo-SW (PSP10003) — 0.464
  19. APlusPlus-Leucistic-ITW (PSP10058) — 0.463
  20. Orissa-India-4-Mush (PSP10073) — 0.462

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
07c456a5bb6a7b4ff7c4a2a1104afdfbf99aa0e417b525e46b879a4d5076c2d8
Stamping Certificate
Download PDF (39.4 KB)
SHASUM Hash
6fbf9e71320134b628c026628c5262bb3171bfcb4bcd2320d341c7206cb8475f

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