Samui-2-redo-PS
PSP 10049
DNA Source: Premium Spores
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 0
- No. of Contigs (>= 50K bp)
- 0
- Total Length (>= 25K bp)
- 0
- Total Length (>= 50K bp)
- 0
- Total Contigs
- 14,897
- Largest Contig
- 9,079
- Total Length
- 10,616,286
- GC (%)
- 45.42
- N50
- 685
Variants
PsiT1
11 variants
—
11 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Thr246Ile
c.737C>T
missense variant
C/T
CM039007.1:1664333
PsiT1
MODERATE
p.Thr386Ala
c.1156A>G
missense variant
A/G
CM039007.1:1664803
PsiT1
MODERATE
p.Ile505Val
c.1513A>G
missense variant
A/G
CM039007.1:1665277
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Met542Ile
c.1626G>A
missense variant
G/A
CM039007.1:1665570
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Glu746Gly
c.2237A>G
missense variant
A/G
CM039007.1:1666605
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiD
2 variants
—
2 MODERATE
PsiD
MODERATE
p.Ile68Asn
c.203T>A
missense variant
A/T
CM039007.1:1677348
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Samui-2-PS (PSP10048) — 0.150
- Samui-1-redo-PS (PSP10047) — 0.167
- KOH-Samui-1-ITW (PSP10063) — 0.267
- KOH-Samui-2-ITW (PSP10064) — 0.290
- Thailand-Koh-Samui-1-Mush (PSP10080) — 0.317
- Thai-1-PS (PSP10053) — 0.401
- Mexican_Dutch_King-1-PS (PSP10070) — 0.406
- BM2-UM-WM (PSP10126) — 0.413
- Chitwan-1-SW (PSP10002) — 0.421
- Blue-Magnolia-Rust (PSP10086) — 0.422
- Mazatapec (PSP10093) — 0.427
- Z-strain-1-Mush (PSP10083) — 0.427
- Cambodian--1-PS (PSP10060) — 0.430
- Mazatapec-cube-1-Mush (PSP10068) — 0.431
- BM16 (PSP10087) — 0.433
- GoldenCoast-UM (PSP10109) — 0.434
- Pink-Buffalo-2-PS (PSP10046) — 0.434
- Mazatapec-2-SW (PSP10006) — 0.434
- Penvy-2-SW (PSP10075) — 0.434
- BM1-UM-WM (PSP10124) — 0.434
Most Distant
- Albino-Aplus-1-SW (PSP10013) — 0.548
- Albino-Aplus-3-PS (PSP10000) — 0.542
- Aplusplus (PSP10085) — 0.541
- AAplus-4-Mush (PSP10057) — 0.540
- Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.528
- Amazon-ITW-WM (PSP10122) — 0.525
- Leucistic_GT2-ITW (PSP10067) — 0.517
- Leucistic_GT1-ITW (PSP10066) — 0.512
- Leucistic-Ecuador-ITW-WM (PSP10133) — 0.480
- APlusPlus-Leucistic-ITW (PSP10058) — 0.478
- Leucistic-Ecuador-ITW (PSP10065) — 0.478
- Blue-Meanie-ITW-WM (PSP10128) — 0.474
- Treasure-coast-2-PS (PSP10055) — 0.470
- BM1b-UM-WM (PSP10125) — 0.470
- Treasure-coast-3-PS (PSP10056) — 0.470
- Treasure-coast-1-PS (PSP10054) — 0.469
- Treasure-Coast-2-Mush (PSP10082) — 0.469
- ColumbiaRust-1-SW (PSP10021) — 0.468
- Blue-Magnolia-Rust-UM-WM (PSP10127) — 0.466
- MGC_2016_unknown_strain (PSP10012) — 0.461
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
2b6aead6d0ff1e3d
445fdac32f900cae f033854157f9d60e 3a0b2add4ea3f461 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
72e8fe8963009a521fe331173cb97b74 ebc0f0ab3f7ba280 75b918bd2d193a81