Panaeolus-Copelandia-Tropicalis-2-Mush
PSP 10077
DNA Source: Mushrooms.com
General Information
- Sample Name
-
(NOTE: This is likely Cubensis and not Panaeolus)
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 39
- No. of Contigs (>= 50K bp)
- 0
- Total Length (>= 25K bp)
- 1,195,713
- Total Length (>= 50K bp)
- 0
- Total Contigs
- 9,853
- Largest Contig
- 41,504
- Total Length
- 39,951,895
- GC (%)
- 46.11
- N50
- 6,767
Variants
PsiT1
8 variants
—
1 HIGH 7 MODERATE
PsiT1
MODERATE
p.Leu15Val
c.43C>G
missense variant
C/G
CM039007.1:1663467
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
HIGH
p.Tyr355*
c.1065T>A
stop gained
T/A
CM039007.1:1664712
PsiT1
MODERATE
p.Val413Ile
c.1237G>A
missense variant
G/A
CM039007.1:1664884
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
1 variant
—
1 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiM
1 variant
—
1 MODERATE
PsiM
MODERATE
p.Arg102Lys
c.305G>A
missense variant
C/T
CM039007.1:1674573
PsiD
3 variants
—
3 MODERATE
PsiD
MODERATE
p.Gly206Asp
c.617G>A
missense variant
C/T
CM039007.1:1676885
PsiD
MODERATE
p.Gly206Ser
c.616G>A
missense variant
C/T
CM039007.1:1676886
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Albino-Aplus-3-PS (PSP10000) — 0.078
- Aplusplus (PSP10085) — 0.078
- AAplus-4-Mush (PSP10057) — 0.079
- Albino-Aplus-1-SW (PSP10013) — 0.106
- Amazon-ITW-WM (PSP10122) — 0.159
- Leucistic_GT1-ITW (PSP10066) — 0.237
- Blue-Magnolia-Rust-UM-WM (PSP10127) — 0.245
- Leucistic_GT2-ITW (PSP10067) — 0.248
- Blue-Meanie-ITW-WM (PSP10128) — 0.286
- Bplus_Denver (PSP10010) — 0.294
- BplusONT-WM (PSP10141) — 0.297
- Leucistic-Ecuador-ITW (PSP10065) — 0.302
- Leucistic-Ecuador-ITW-WM (PSP10133) — 0.305
- Golden-Teacher (PSP10089) — 0.318
- APlusPlus-Leucistic-ITW (PSP10058) — 0.321
- Ecuador-3-PS (PSP10061) — 0.322
- Z-strain-3-PS (PSP10084) — 0.322
- Huautla-3-PS (PSP10005) — 0.323
- GoldenTeacher-3-SW (PSP10029) — 0.324
- Thailand-Koh-Samui-1-Mush (PSP10080) — 0.324
Most Distant
- Penvy-Col4-PS (PSP10043) — 0.547
- Penvy-Col5-PS (PSP10044) — 0.547
- Penvy-1-PS (PSP10045) — 0.547
- Penvy-2-SW (PSP10075) — 0.546
- Samui-1-redo-PS (PSP10047) — 0.536
- Costa-Rica-2-redo-SW (PSP10023) — 0.531
- Costa-Rica-1-redo-SW (PSP10022) — 0.531
- WFB-UM-WM (PSP10121) — 0.531
- WFB-UM (PSP10112) — 0.529
- Samui-2-redo-PS (PSP10049) — 0.528
- Treasure-coast-2-PS (PSP10055) — 0.514
- Treasure-coast-1-PS (PSP10054) — 0.513
- Treasure-coast-3-PS (PSP10056) — 0.513
- Treasure-Coast-2-Mush (PSP10082) — 0.512
- Costa-Rica-3-redo-SW (PSP10024) — 0.511
- ColumbiaRust-1-SW (PSP10021) — 0.510
- Bplus-ITW-WM (PSP10129) — 0.503
- Tosohatchee-print-ITW (PSP10081) — 0.503
- Pink-Buffalo-2-PS (PSP10046) — 0.497
- Mazatapec-2-SW (PSP10006) — 0.496
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
d9089429c418365d
a1a1842810a30e95 5afbd1dcf0cf148e 87b0fa8248e95507 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
bf0325d02266b72bb326ffc77623ad2f 481fdfe4ad85f508 4f258e7443aab49b