Advanced Strain Search

Malabar-3-PS

PSP 10039

DNA Source: Premium Spores

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
premiumspores.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
394
No. of Contigs (>= 50K bp)
189
Total Length (>= 25K bp)
28,553,509
Total Length (>= 50K bp)
21,414,950
Total Contigs
4,662
Largest Contig
467,392
Total Length
41,846,217
GC (%)
46.28
N50
52,394

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 6 variants — 1 HIGH   5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
HIGH p.Ser223* c.668C>G stop gained C/G
CM039007.1:1664264
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Malabar-2-PS (PSP10038) — 0.014
  2. Malabar-1-PS (PSP10037) — 0.015
  3. Malabar-2-SW (PSP10035) — 0.015
  4. Malabar-3-SW (PSP10036) — 0.017
  5. Mazatapec-2-SW (PSP10006) — 0.048
  6. Mazatapec-cube-1-Mush (PSP10068) — 0.062
  7. WFB-UM (PSP10112) — 0.273
  8. WFB-UM-WM (PSP10121) — 0.274
  9. BM1b-UM-WM (PSP10125) — 0.323
  10. Mazatapec (PSP10093) — 0.324
  11. BM1-UM (PSP10098) — 0.347
  12. BM16 (PSP10087) — 0.358
  13. Samui-2-PS (PSP10048) — 0.381
  14. Orissa-India-print-ITW (PSP10074) — 0.392
  15. GoldenTeacher-1-SW (PSP10027) — 0.404
  16. PES-2-SW (PSP10008) — 0.406
  17. Thailand-Koh-Samui-1-Mush (PSP10080) — 0.407
  18. KOH-Samui-1-ITW (PSP10063) — 0.408
  19. Maui-2-PS (PSP10041) — 0.409
  20. Ecuador-3-PS (PSP10061) — 0.409

Most Distant

  1. Albino-Aplus-1-SW (PSP10013) — 0.507
  2. Penvy-Col5-PS (PSP10044) — 0.501
  3. Penvy-1-PS (PSP10045) — 0.501
  4. Aplusplus (PSP10085) — 0.501
  5. Penvy-Col4-PS (PSP10043) — 0.501
  6. Penvy-2-SW (PSP10075) — 0.501
  7. Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.495
  8. Costa-Rica-1-redo-SW (PSP10022) — 0.493
  9. Costa-Rica-2-redo-SW (PSP10023) — 0.487
  10. AAplus-4-Mush (PSP10057) — 0.486
  11. Albino-Aplus-3-PS (PSP10000) — 0.486
  12. Leucistic_GT2-ITW (PSP10067) — 0.486
  13. Orissa-India-1-Mush (PSP10072) — 0.486
  14. Escondido-Mexico-1-Mush (PSP10062) — 0.476
  15. Leucistic_GT1-ITW (PSP10066) — 0.473
  16. Costa-Rica-3-redo-SW (PSP10024) — 0.465
  17. Amazon-ITW-WM (PSP10122) — 0.465
  18. Costa-Rica-1-redo-SW (PSP10003) — 0.463
  19. APlusPlus-Leucistic-ITW (PSP10058) — 0.462
  20. Orissa-India-4-Mush (PSP10073) — 0.462

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
7d0798ca5e396c89dd385974de19e886fa707b81d7cf373d788e4c9c434d4365
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
b9e8f4ce48b70e591e861ada145720ae1fa4028ec4982ae299d427cc14eeec8e

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