Samui-1-redo-PS
PSP 10047
DNA Source: Premium Spores
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 0
- No. of Contigs (>= 50K bp)
- 0
- Total Length (>= 25K bp)
- 0
- Total Length (>= 50K bp)
- 0
- Total Contigs
- 3,782
- Largest Contig
- 12,107
- Total Length
- 2,588,867
- GC (%)
- 44.25
- N50
- 632
Variants
PsiT1
10 variants
—
10 MODERATE
PsiT1
MODERATE
p.Glu121Gly
c.362A>G
missense variant & splice region variant
A/G
CM039007.1:1663786
PsiT1
MODERATE
p.Ile214Leu
c.640A>C
missense variant
A/C
CM039007.1:1664184
PsiT1
MODERATE
p.Arg266Ser
c.798A>T
missense variant
A/T
CM039007.1:1664394
PsiT1
MODERATE
p.Ile505Val
c.1513A>G
missense variant
A/G
CM039007.1:1665277
PsiT1
MODERATE
p.His539Arg
c.1616A>G
missense variant
A/G
CM039007.1:1665560
PsiT1
MODERATE
p.Val579Ile
c.1735G>A
missense variant
G/A
CM039007.1:1666040
PsiT1
MODERATE
p.Val579Ala
c.1736T>C
missense variant
T/C
CM039007.1:1666041
PsiT1
MODERATE
p.Ser680Ala
c.2038T>G
missense variant
T/G
CM039007.1:1666406
PsiT1
MODERATE
p.Leu689Val
c.2065T>G
missense variant
T/G
CM039007.1:1666433
PsiT1
MODERATE
p.Arg752Gly
c.2254A>G
missense variant
A/G
CM039007.1:1666622
PsiH
2 variants
—
2 MODERATE
PsiH
MODERATE
p.Ser7Phe
c.20C>T
missense variant
C/T
CM039007.1:1667530
PsiH
MODERATE
p.Ile34Val
c.100A>G
missense variant
A/G
CM039007.1:1667610
PsiD
1 variant
—
1 MODERATE
PsiD
MODERATE
p.Leu22Phe
c.66G>T
missense variant
C/A
CM039007.1:1677485
Genetic Relatives
Nearest
- Samui-2-redo-PS (PSP10049) — 0.167
- Samui-2-PS (PSP10048) — 0.175
- KOH-Samui-1-ITW (PSP10063) — 0.284
- KOH-Samui-2-ITW (PSP10064) — 0.302
- Thailand-Koh-Samui-1-Mush (PSP10080) — 0.339
- Thai-1-PS (PSP10053) — 0.404
- Mexican_Dutch_King-1-PS (PSP10070) — 0.414
- Penvy-2-SW (PSP10075) — 0.419
- Penvy-1-PS (PSP10045) — 0.419
- Penvy-Col4-PS (PSP10043) — 0.419
- Penvy-Col5-PS (PSP10044) — 0.419
- Chitwan-1-SW (PSP10002) — 0.420
- BM2-UM-WM (PSP10126) — 0.424
- Z-strain-1-Mush (PSP10083) — 0.429
- Orissa-India-4-Mush (PSP10073) — 0.430
- Blue-Magnolia-Rust (PSP10086) — 0.433
- Pink-Buffalo-2-PS (PSP10046) — 0.434
- Golden-Teacher-ITW-WM (PSP10130) — 0.437
- Orissa-India-1-Mush (PSP10072) — 0.438
- Mazatapec (PSP10093) — 0.438
Most Distant
- Albino-Aplus-1-SW (PSP10013) — 0.554
- Albino-Aplus-3-PS (PSP10000) — 0.551
- AAplus-4-Mush (PSP10057) — 0.548
- Aplusplus (PSP10085) — 0.547
- Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.536
- Amazon-ITW-WM (PSP10122) — 0.534
- Leucistic_GT2-ITW (PSP10067) — 0.525
- Leucistic_GT1-ITW (PSP10066) — 0.520
- Blue-Meanie-ITW-WM (PSP10128) — 0.486
- Leucistic-Ecuador-ITW (PSP10065) — 0.482
- Leucistic-Ecuador-ITW-WM (PSP10133) — 0.482
- Blue-Magnolia-Rust-UM-WM (PSP10127) — 0.482
- APlusPlus-Leucistic-ITW (PSP10058) — 0.481
- BM1b-UM-WM (PSP10125) — 0.478
- BM1-UM (PSP10098) — 0.468
- Treasure-coast-2-PS (PSP10055) — 0.467
- Treasure-coast-3-PS (PSP10056) — 0.467
- Treasure-Coast-2-Mush (PSP10082) — 0.466
- Treasure-coast-1-PS (PSP10054) — 0.466
- Bplus-3-PS (PSP10001) — 0.465
Sequence Data Downloads
The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.
Blockchain Registration Information
- Transaction ID
-
eaaadac521be5c24
8dfd824928dfc94e 87ad0ec6474da2b1 c7d7319669e7e579 - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
05519d144dd7973e9cc8ffbcd2f49913 99d34379776e1e69 5f31b00e1c04524c