Advanced Strain Search

Malabar-2-SW

PSP 10035

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
396
No. of Contigs (>= 50K bp)
187
Total Length (>= 25K bp)
28,796,799
Total Length (>= 50K bp)
21,455,320
Total Contigs
3,906
Largest Contig
661,754
Total Length
41,352,012
GC (%)
46.14
N50
54,722

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 5 variants — 5 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. Malabar-1-PS (PSP10037) — 0.015
  2. Malabar-2-PS (PSP10038) — 0.015
  3. Malabar-3-PS (PSP10039) — 0.015
  4. Malabar-3-SW (PSP10036) — 0.016
  5. Mazatapec-2-SW (PSP10006) — 0.050
  6. Mazatapec-cube-1-Mush (PSP10068) — 0.063
  7. WFB-UM-WM (PSP10121) — 0.274
  8. WFB-UM (PSP10112) — 0.274
  9. BM1b-UM-WM (PSP10125) — 0.322
  10. Mazatapec (PSP10093) — 0.324
  11. BM1-UM (PSP10098) — 0.347
  12. BM16 (PSP10087) — 0.358
  13. Samui-2-PS (PSP10048) — 0.381
  14. Orissa-India-print-ITW (PSP10074) — 0.392
  15. GoldenTeacher-1-SW (PSP10027) — 0.404
  16. PES-2-SW (PSP10008) — 0.407
  17. KOH-Samui-1-ITW (PSP10063) — 0.408
  18. Thailand-Koh-Samui-1-Mush (PSP10080) — 0.408
  19. Maui-2-PS (PSP10041) — 0.409
  20. Ecuador-3-PS (PSP10061) — 0.410

Most Distant

  1. Albino-Aplus-1-SW (PSP10013) — 0.508
  2. Penvy-1-PS (PSP10045) — 0.502
  3. Penvy-Col5-PS (PSP10044) — 0.502
  4. Penvy-Col4-PS (PSP10043) — 0.502
  5. Aplusplus (PSP10085) — 0.502
  6. Penvy-2-SW (PSP10075) — 0.501
  7. Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.495
  8. Costa-Rica-1-redo-SW (PSP10022) — 0.493
  9. AAplus-4-Mush (PSP10057) — 0.487
  10. Costa-Rica-2-redo-SW (PSP10023) — 0.487
  11. Albino-Aplus-3-PS (PSP10000) — 0.487
  12. Orissa-India-1-Mush (PSP10072) — 0.486
  13. Leucistic_GT2-ITW (PSP10067) — 0.486
  14. Escondido-Mexico-1-Mush (PSP10062) — 0.477
  15. Leucistic_GT1-ITW (PSP10066) — 0.473
  16. Costa-Rica-3-redo-SW (PSP10024) — 0.466
  17. Amazon-ITW-WM (PSP10122) — 0.465
  18. Costa-Rica-1-redo-SW (PSP10003) — 0.463
  19. Orissa-India-4-Mush (PSP10073) — 0.463
  20. APlusPlus-Leucistic-ITW (PSP10058) — 0.462

Sequence Data Downloads

Sequence data files (FASTQ, BAM, VCF, and assemblies) are available to the registered holder of this report. If you are the holder, log in to download. Otherwise, please contact us.

Blockchain Registration Information

Transaction ID
c7392f54181cd29138ec45eba4abb43f94c0bc805c1af7889b36d1fe22818df0
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
53458c4fe9516ee2a914c3b754984f9259a6d229d6ea4dbdad4b7e55894ee574

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