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Thailand-Koh-Samui-1-Mush

PSP 10080

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
382
No. of Contigs (>= 50K bp)
119
Total Length (>= 25K bp)
20,589,406
Total Length (>= 50K bp)
11,534,281
Total Contigs
10,180
Largest Contig
468,814
Total Length
46,213,138
GC (%)
46.04
N50
19,809

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiT1 21 variants — 2 HIGH   19 MODERATE
PsiT1
MODERATE p.Glu121Gly c.362A>G missense variant & splice region variant A/G
CM039007.1:1663786
PsiT1
MODERATE p.Lys166Gln c.496A>C missense variant A/C
CM039007.1:1663979
PsiT1
MODERATE p.Ile214Leu c.640A>C missense variant A/C
CM039007.1:1664184
PsiT1
HIGH p.Ser223* c.668C>G stop gained C/G
CM039007.1:1664264
PsiT1
MODERATE p.Thr246Ile c.737C>T missense variant C/T
CM039007.1:1664333
PsiT1
MODERATE p.Arg266Ser c.798A>T missense variant A/T
CM039007.1:1664394
PsiT1
MODERATE p.Thr386Ala c.1156A>G missense variant A/G
CM039007.1:1664803
PsiT1
MODERATE p.Ile505Val c.1513A>G missense variant A/G
CM039007.1:1665277
PsiT1
MODERATE p.His539Arg c.1616A>G missense variant A/G
CM039007.1:1665560
PsiT1
MODERATE p.Met542Ile c.1626G>A missense variant G/A
CM039007.1:1665570
PsiT1
MODERATE p.Ile563Leu c.1687A>C missense variant A/C
CM039007.1:1665631
PsiT1
MODERATE p.Val564Ile c.1690G>A missense variant G/A
CM039007.1:1665634
PsiT1
MODERATE p.Asn572Asp c.1714A>G missense variant A/G
CM039007.1:1665658
PsiT1
HIGH c.1720+1G>T c.1720+1G>T splice donor variant & intron variant G/T
CM039007.1:1665665
PsiT1
MODERATE p.Val579Ile c.1735G>A missense variant G/A
CM039007.1:1666040
PsiT1
MODERATE p.Val579Ala c.1736T>C missense variant T/C
CM039007.1:1666041
PsiT1
MODERATE p.Ser680Ala c.2038T>G missense variant T/G
CM039007.1:1666406
PsiT1
MODERATE p.Leu689Val c.2065T>G missense variant T/G
CM039007.1:1666433
PsiT1
MODERATE p.Glu746Gly c.2237A>G missense variant A/G
CM039007.1:1666605
PsiT1
MODERATE p.Arg752Gly c.2254A>G missense variant A/G
CM039007.1:1666622
PsiT1
MODERATE p.Gln858Leu c.2573A>T missense variant A/T
CM039007.1:1666941
PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 4 variants — 4 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485
PsiD
MODERATE p.Gln2Arg c.5A>G missense variant T/C
CM039007.1:1677603
Fvcpc2 1 variant — 1 MODERATE
Fvcpc2
MODERATE p.Asp91Asn c.271G>A missense variant G/A
CM038999.1:1972978

Genetic Relatives

Nearest

  1. Samui-2-PS (PSP10048) — 0.201
  2. Golden-Teacher_Denver (PSP10011) — 0.228
  3. Blue-Magnolia-Rust-UM-WM (PSP10127) — 0.242
  4. BM1-UM (PSP10098) — 0.252
  5. BM16 (PSP10087) — 0.256
  6. KOH-Samui-1-ITW (PSP10063) — 0.280
  7. AAplus-4-Mush (PSP10057) — 0.309
  8. Albino-Aplus-3-PS (PSP10000) — 0.309
  9. KOH-Samui-2-ITW (PSP10064) — 0.312
  10. Samui-2-redo-PS (PSP10049) — 0.317
  11. Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077) — 0.324
  12. PES-2-SW (PSP10008) — 0.326
  13. Ecuador-3-PS (PSP10061) — 0.329
  14. Bplus_Denver (PSP10010) — 0.329
  15. BplusONT-WM (PSP10141) — 0.334
  16. Maui-3-PS (PSP10042) — 0.335
  17. GoldenTeacher-1-SW (PSP10027) — 0.335
  18. Maui-2-PS (PSP10041) — 0.335
  19. Maui-1-PS (PSP10040) — 0.336
  20. GoldenTeacher-3-SW (PSP10029) — 0.337

Most Distant

  1. Penvy-1-PS (PSP10045) — 0.509
  2. Penvy-Col5-PS (PSP10044) — 0.509
  3. Penvy-Col4-PS (PSP10043) — 0.509
  4. Penvy-2-SW (PSP10075) — 0.508
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.501
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.499
  7. Treasure-coast-2-PS (PSP10055) — 0.475
  8. Treasure-coast-3-PS (PSP10056) — 0.474
  9. Treasure-coast-1-PS (PSP10054) — 0.474
  10. ColumbiaRust-1-SW (PSP10021) — 0.474
  11. Treasure-Coast-2-Mush (PSP10082) — 0.472
  12. Bplus-ITW-WM (PSP10129) — 0.468
  13. WFB-UM-WM (PSP10121) — 0.466
  14. Guapile-ITW-col-WM (PSP10132) — 0.464
  15. WFB-UM (PSP10112) — 0.462
  16. Tosohatchee-print-ITW (PSP10081) — 0.459
  17. Orissa-India-1-Mush (PSP10072) — 0.454
  18. Costa-Rica-3-redo-SW (PSP10024) — 0.453
  19. Pink-Buffalo-2-PS (PSP10046) — 0.440
  20. Roatan-Honduras-4-Mush (PSP10079) — 0.429

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
631773eb0f9498de4ab1b5c12699be67d37fd8513c51c6d19d8bbd8c9c605b16
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
103759e3bc605d5d754afb43e29414e19caa609f4160d1a1e16b406af6a4f06d

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