Thailand-Koh-Samui-1-Mush
PSP 10080
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
File Downloads
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 382
- No. of Contigs (>= 50K bp)
- 119
- Total Length (>= 25K bp)
- 20,589,406
- Total Length (>= 50K bp)
- 11,534,281
- Total Contigs
- 10,180
- Largest Contig
- 468,814
- Total Length
- 46,213,138
- GC (%)
- 46.04
- N50
- 19,809
Variants
| PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
| PsiT1 | c.496A>C | p.Lys166Gln | missense variant | moderate | CM039007.1 | 1663979 | A/C |
| PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
| PsiT1 | c.668C>G | p.Ser223* | stop gained | high | CM039007.1 | 1664264 | C/G |
| PsiT1 | c.737C>T | p.Thr246Ile | missense variant | moderate | CM039007.1 | 1664333 | C/T |
| PsiT1 | c.798A>T | p.Arg266Ser | missense variant | moderate | CM039007.1 | 1664394 | A/T |
| PsiT1 | c.1156A>G | p.Thr386Ala | missense variant | moderate | CM039007.1 | 1664803 | A/G |
| PsiT1 | c.1513A>G | p.Ile505Val | missense variant | moderate | CM039007.1 | 1665277 | A/G |
| PsiT1 | c.1616A>G | p.His539Arg | missense variant | moderate | CM039007.1 | 1665560 | A/G |
| PsiT1 | c.1626G>A | p.Met542Ile | missense variant | moderate | CM039007.1 | 1665570 | G/A |
| PsiT1 | c.1687A>C | p.Ile563Leu | missense variant | moderate | CM039007.1 | 1665631 | A/C |
| PsiT1 | c.1690G>A | p.Val564Ile | missense variant | moderate | CM039007.1 | 1665634 | G/A |
| PsiT1 | c.1714A>G | p.Asn572Asp | missense variant | moderate | CM039007.1 | 1665658 | A/G |
| PsiT1 | c.1720+1G>T | splice donor variant & intron variant | high | CM039007.1 | 1665665 | G/T | |
| PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
| PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
| PsiT1 | c.2038T>G | p.Ser680Ala | missense variant | moderate | CM039007.1 | 1666406 | T/G |
| PsiT1 | c.2065T>G | p.Leu689Val | missense variant | moderate | CM039007.1 | 1666433 | T/G |
| PsiT1 | c.2237A>G | p.Glu746Gly | missense variant | moderate | CM039007.1 | 1666605 | A/G |
| PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
| PsiT1 | c.2573A>T | p.Gln858Leu | missense variant | moderate | CM039007.1 | 1666941 | A/T |
| PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
| PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
| PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
| PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
| PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
| PsiD | c.5A>G | p.Gln2Arg | missense variant | moderate | CM039007.1 | 1677603 | T/C |
| Fvcpc2 | c.271G>A | p.Asp91Asn | missense variant | moderate | CM038999.1 | 1972978 | G/A |
Nearest genetic relatives (All Samples)
0
0.092
0.183
0.275
0.367
- 0.201 Samui-2-PS (PSP10048)
- 0.228 Golden-Teacher Denver (PSP10011)
- 0.242 Blue-Magnolia-Rust-UM-WM (PSP10127)
- 0.252 BM1-UM (PSP10098)
- 0.256 BM16 (PSP10087)
- 0.280 KOH-Samui-1-ITW (PSP10063)
- 0.309 AAplus-4-Mush (PSP10057)
- 0.309 Albino-Aplus-3-PS (PSP10000)
- 0.312 KOH-Samui-2-ITW (PSP10064)
- 0.317 Samui-2-redo-PS (PSP10049)
- 0.324 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
- 0.326 PES-2-SW (PSP10008)
- 0.329 Ecuador-3-PS (PSP10061)
- 0.329 Bplus Denver (PSP10010)
- 0.334 BplusONT-WM (PSP10141)
- 0.335 Maui-3-PS (PSP10042)
- 0.335 GoldenTeacher-1-SW (PSP10027)
- 0.335 Maui-2-PS (PSP10041)
- 0.336 Maui-1-PS (PSP10040)
- 0.337 GoldenTeacher-3-SW (PSP10029)
Most genetically distant strains (All Samples)
0
0.133
0.267
0.400
0.533
- 0.509 Penvy-1-PS (PSP10045)
- 0.509 Penvy-Col5-PS (PSP10044)
- 0.509 Penvy-Col4-PS (PSP10043)
- 0.508 Penvy-2-SW (PSP10075)
- 0.501 Costa-Rica-1-redo-SW (PSP10022)
- 0.499 Costa-Rica-2-redo-SW (PSP10023)
- 0.475 Treasure-coast-2-PS (PSP10055)
- 0.474 Treasure-coast-3-PS (PSP10056)
- 0.474 Treasure-coast-1-PS (PSP10054)
- 0.474 ColumbiaRust-1-SW (PSP10021)
- 0.472 Treasure-Coast-2-Mush (PSP10082)
- 0.468 Bplus-ITW-WM (PSP10129)
- 0.466 WFB-UM-WM (PSP10121)
- 0.464 Guapile-ITW-col-WM (PSP10132)
- 0.462 WFB-UM (PSP10112)
- 0.459 Tosohatchee-print-ITW (PSP10081)
- 0.454 Orissa-India-1-Mush (PSP10072)
- 0.453 Costa-Rica-3-redo-SW (PSP10024)
- 0.440 Pink-Buffalo-2-PS (PSP10046)
- 0.429 Roatan-Honduras-4-Mush (PSP10079)
Blockchain Registration Information
- Transaction ID
-
631773eb0f9498de
4ab1b5c12699be67 d37fd8513c51c6d1 9d8bbd8c9c605b16 - Stamping Certificate
- Download PDF (39.8 KB)
- SHASUM Hash
-
103759e3bc605d5d754afb43e29414e1 9caa609f4160d1a1 e16b406af6a4f06d
