Leucistic_GT1-ITW
PSP 10066
DNA Source: Inoculate the World
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- inoculatetheworld.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 409
- No. of Contigs (>= 50K bp)
- 199
- Total Length (>= 25K bp)
- 29,608,255
- Total Length (>= 50K bp)
- 21,927,163
- Total Contigs
- 2,598
- Largest Contig
- 456,896
- Total Length
- 39,960,364
- GC (%)
- 46.12
- N50
- 60,300
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.061 Leucistic GT2-ITW (PSP10067)
- 0.222 Aplusplus (PSP10085)
- 0.235 Albino-Aplus-3-PS (PSP10000)
- 0.236 AAplus-4-Mush (PSP10057)
- 0.237 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
- 0.252 Albino-Aplus-1-SW (PSP10013)
- 0.300 Amazon-ITW-WM (PSP10122)
- 0.346 Blue-Meanie-ITW-WM (PSP10128)
- 0.346 Blue-Magnolia-Rust-UM-WM (PSP10127)
- 0.350 Escondido-Mexico-1-Mush (PSP10062)
- 0.355 Bplus Denver (PSP10010)
- 0.356 Leucistic-Ecuador-ITW (PSP10065)
- 0.358 Puerto-Rican-ITW (PSP10078)
- 0.358 BplusONT-WM (PSP10141)
- 0.362 Leucistic-Ecuador-ITW-WM (PSP10133)
- 0.366 APlusPlus-Leucistic-ITW (PSP10058)
- 0.371 Huautla-3-PS (PSP10005)
- 0.373 Huautla-3-redo-SW (PSP10031)
- 0.374 Golden-Teacher (PSP10089)
- 0.374 Bplus-2-redo-SW (PSP10015)
Most genetically distant strains (All Samples)
- 0.520 Samui-1-redo-PS (PSP10047)
- 0.515 Costa-Rica-1-redo-SW (PSP10022)
- 0.515 Costa-Rica-2-redo-SW (PSP10023)
- 0.512 Samui-2-redo-PS (PSP10049)
- 0.503 Penvy-Col4-PS (PSP10043)
- 0.503 Penvy-Col5-PS (PSP10044)
- 0.503 Penvy-1-PS (PSP10045)
- 0.502 Penvy-2-SW (PSP10075)
- 0.500 Costa-Rica-3-redo-SW (PSP10024)
- 0.498 WFB-UM-WM (PSP10121)
- 0.495 ColumbiaRust-1-SW (PSP10021)
- 0.495 WFB-UM (PSP10112)
- 0.485 Treasure-coast-1-PS (PSP10054)
- 0.485 Treasure-coast-2-PS (PSP10055)
- 0.485 Treasure-coast-3-PS (PSP10056)
- 0.483 Treasure-Coast-2-Mush (PSP10082)
- 0.482 Tosohatchee-print-ITW (PSP10081)
- 0.482 Mazatapec-cube-1-Mush (PSP10068)
- 0.482 Mazatapec-2-SW (PSP10006)
- 0.481 Guapile-ITW-col-WM (PSP10132)
Blockchain Registration Information
- Transaction ID
-
8950b5aadb38bd72
6bf74ecff4dd89ea a3e632aa24d1492a 809e49185a1907b8 - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
46de04a83576129f
20c80d013c2f9ccf 92e8b68703a6d678 0fe5fbfb71ed9a1e