Advanced Strain Search

DNA-PK-15SEPT2022

PSP 12863

DNA Source: Good Cap Pharmaceuticals

General Information

Accession Date
March 19, 2023
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
411
No. of Contigs (>= 50K bp)
189
Total Length (>= 25K bp)
27,475,910
Total Length (>= 50K bp)
19,691,536
Total Contigs
7,720
Largest Contig
425,773
Total Length
45,218,698
GC (%)
46.5
N50
39,008

Learn more about blob plots.

Blob Plot
High-resolution blob plot

Variants

PsiH 1 variant — 1 MODERATE
PsiH
MODERATE p.Ser7Phe c.20C>T missense variant C/T
CM039007.1:1667530
PsiM 1 variant — 1 MODERATE
PsiM
MODERATE p.Arg102Lys c.305G>A missense variant C/T
CM039007.1:1674573
PsiD 3 variants — 3 MODERATE
PsiD
MODERATE p.Gly206Asp c.617G>A missense variant C/T
CM039007.1:1676885
PsiD
MODERATE p.Gly206Ser c.616G>A missense variant C/T
CM039007.1:1676886
PsiD
MODERATE p.Leu22Phe c.66G>T missense variant C/A
CM039007.1:1677485

Genetic Relatives

Nearest

  1. True-Albino-Teacher-ITW-WM (PSP10140) — 0.241
  2. Avery-Albino-ITW-WM (PSP10123) — 0.243
  3. Burma-1-SW (PSP10020) — 0.253
  4. Cambodian--1-PS (PSP10060) — 0.261
  5. Bplus (PSP10088) — 0.261
  6. HUA-Early (PSP10092) — 0.262
  7. GoldenCoast-UM (PSP10109) — 0.269
  8. Orissa-India-ITW (PSP10071) — 0.270
  9. Maui-3-PS (PSP10042) — 0.270
  10. Bplus-3-redo-SW (PSP10016) — 0.270
  11. Maui-2-PS (PSP10041) — 0.270
  12. Maui-1-PS (PSP10040) — 0.270
  13. Ecuador-3-SW (PSP10025) — 0.270
  14. GoldenTeacher-3-SW (PSP10029) — 0.271
  15. Bplus-2-redo-SW (PSP10015) — 0.271
  16. Ecuador-3-PS (PSP10061) — 0.271
  17. GoldenTeacher-2-SW (PSP10028) — 0.271
  18. Bplus-1-redo-SW (PSP10014) — 0.272
  19. Bplus-3-PS (PSP10001) — 0.272
  20. McKennaii-1-PS (PSP10069) — 0.272

Most Distant

  1. Treasure-coast-2-PS (PSP10055) — 0.535
  2. Treasure-coast-1-PS (PSP10054) — 0.534
  3. Treasure-coast-3-PS (PSP10056) — 0.534
  4. Treasure-Coast-2-Mush (PSP10082) — 0.530
  5. Costa-Rica-1-redo-SW (PSP10022) — 0.529
  6. Costa-Rica-2-redo-SW (PSP10023) — 0.529
  7. Bplus-ITW-WM (PSP10129) — 0.517
  8. Costa-Rica-3-redo-SW (PSP10024) — 0.512
  9. Guapile-ITW-col-WM (PSP10132) — 0.507
  10. Tosohatchee-print-ITW (PSP10081) — 0.502
  11. Roatan-Honduras-4-Mush (PSP10079) — 0.502
  12. Chitwan-1-SW (PSP10002) — 0.498
  13. Orissa-India-1-Mush (PSP10072) — 0.496
  14. ColumbiaRust-1-SW (PSP10021) — 0.493
  15. Arenal-Volcano-1-Mush (PSP10059) — 0.491
  16. Luminous-lucies-3-PS (PSP10033) — 0.490
  17. Luminous-lucies-2-PS (PSP10032) — 0.490
  18. Luminous-lucies-1-PS (PSP10034) — 0.490
  19. Z-strain-1-Mush (PSP10083) — 0.487
  20. Orissa-India-4-Mush (PSP10073) — 0.487

Sequence Data Downloads

The blockchain-registered VCF above can be downloaded by anyone, so its hash can be checked independently against the blockchain record. The remaining sequence data files — FASTQ, BAM and assemblies — are available to authorised accounts. Log in to download, or contact us for access.

Blockchain Registration Information

Transaction ID
03dab24b77e407237351d3f13a3ee6773594e21ff83495f6b2f993799cdef235
Stamping Certificate
Download PDF (39.4 KB)
SHASUM Hash
be0122e172e205ca8b3de4dfa221dbd4c8087d3d1c524674305be58147fa5dc6

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