Bplus_Denver
PSP 10010
DNA Source: Medicinal Genomics
General Information
- Accession Date
- May 31, 2021
- Report Type
- Whole-Genome Sequencing
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 430
- No. of Contigs (>= 50K bp)
- 206
- Total Length (>= 25K bp)
- 28,781,132
- Total Length (>= 50K bp)
- 20,691,995
- Total Contigs
- 3,319
- Largest Contig
- 476,436
- Total Length
- 40,642,705
- GC (%)
- 46.11
- N50
- 51,192
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.028 BplusONT-WM (PSP10141)
- 0.074 Blue-Meanie-ITW-WM (PSP10128)
- 0.084 Orissa-India-print-ITW (PSP10074)
- 0.099 Golden-Teacher (PSP10089)
- 0.100 Huautla-3-PS (PSP10005)
- 0.101 Z-strain-3-PS (PSP10084)
- 0.102 GoldenTeacher-3-SW (PSP10029)
- 0.103 Huautla-3-redo-SW (PSP10031)
- 0.103 GoldenCoast-BAF-B2-UM (PSP10108)
- 0.103 GoldenCoast-BAF-B1-UM (PSP10107)
- 0.104 Ecuador-3-SW (PSP10025)
- 0.104 Huautla-2-redo-SW (PSP10030)
- 0.105 Maui-2-PS (PSP10041)
- 0.105 Ecuador-3-PS (PSP10061)
- 0.106 Gulf-Coast (PSP10091)
- 0.106 Maui-1-PS (PSP10040)
- 0.106 Maui-3-PS (PSP10042)
- 0.106 Gulf-Coast-BAF (PSP10090)
- 0.108 GoldenTeacher-2-SW (PSP10028)
- 0.110 GoldenTeacher-1-SW (PSP10027)
Most genetically distant strains (All Samples)
- 0.700 Penvy-1-PS (PSP10045)
- 0.700 Penvy-Col5-PS (PSP10044)
- 0.700 Penvy-Col4-PS (PSP10043)
- 0.699 Penvy-2-SW (PSP10075)
- 0.643 Costa-Rica-1-redo-SW (PSP10022)
- 0.641 Costa-Rica-2-redo-SW (PSP10023)
- 0.641 Treasure-coast-1-PS (PSP10054)
- 0.640 Treasure-coast-2-PS (PSP10055)
- 0.640 Treasure-coast-3-PS (PSP10056)
- 0.638 Treasure-Coast-2-Mush (PSP10082)
- 0.611 Costa-Rica-3-redo-SW (PSP10024)
- 0.603 Bplus-ITW-WM (PSP10129)
- 0.596 ColumbiaRust-1-SW (PSP10021)
- 0.595 Arenal-Volcano-1-Mush (PSP10059)
- 0.590 Luminous-lucies-2-PS (PSP10032)
- 0.590 Luminous-lucies-3-PS (PSP10033)
- 0.590 Luminous-lucies-1-PS (PSP10034)
- 0.589 Orissa-India-1-Mush (PSP10072)
- 0.584 Roatan-Honduras-4-Mush (PSP10079)
- 0.583 Orissa-India-4-Mush (PSP10073)
Blockchain Registration Information
- Transaction ID
-
f8bb1e25fc0e0187
1b19692b31a53a10 e3abc02b1bb3af2d 08de889d7f9320ce - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
905680bf0daf0667
0e1527920ff3a078 189bd2a055053134 a2701f44434ac15f