Thai-1-PS
PSP 10053
DNA Source: Premium Spores
General Information
- Accession Date
- May 11, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- premiumspores.com
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 1
- No. of Contigs (>= 50K bp)
- 0
- Total Length (>= 25K bp)
- 41,573
- Total Length (>= 50K bp)
- 0
- Total Contigs
- 20,112
- Largest Contig
- 41,573
- Total Length
- 16,870,166
- GC (%)
- 46.21
- N50
- 831
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.109 Mexican Dutch King-1-PS (PSP10070)
- 0.186 Golden-Teacher-ITW-WM (PSP10130)
- 0.200 Blue-Magnolia-Rust (PSP10086)
- 0.202 BM2-UM-WM (PSP10126)
- 0.234 BM1-UM-WM (PSP10124)
- 0.309 Blue-Magnolia-Rust-UM-WM (PSP10127)
- 0.318 Puerto-Rican-ITW (PSP10078)
- 0.324 Bplus-1-redo-SW (PSP10014)
- 0.324 Huautla-2-redo-SW (PSP10030)
- 0.324 Bplus-3-redo-SW (PSP10016)
- 0.325 Bplus-2-redo-SW (PSP10015)
- 0.325 Huautla-3-redo-SW (PSP10031)
- 0.325 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.326 Huautla-3-PS (PSP10005)
- 0.326 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.326 Bplus-3-PS (PSP10001)
- 0.326 Orissa-India-ITW (PSP10071)
- 0.326 McKennaii-1-PS (PSP10069)
- 0.329 Golden-Teacher (PSP10089)
- 0.330 HUA-Early (PSP10092)
Most genetically distant strains (All Samples)
- 0.549 Treasure-coast-2-PS (PSP10055)
- 0.549 Treasure-coast-3-PS (PSP10056)
- 0.548 Treasure-coast-1-PS (PSP10054)
- 0.548 Treasure-Coast-2-Mush (PSP10082)
- 0.532 Tosohatchee-print-ITW (PSP10081)
- 0.531 Costa-Rica-2-redo-SW (PSP10023)
- 0.531 Costa-Rica-1-redo-SW (PSP10022)
- 0.527 Arenal-Volcano-1-Mush (PSP10059)
- 0.527 Luminous-lucies-3-PS (PSP10033)
- 0.527 Luminous-lucies-1-PS (PSP10034)
- 0.526 Luminous-lucies-2-PS (PSP10032)
- 0.526 ColumbiaRust-1-SW (PSP10021)
- 0.523 Costa-Rica-3-redo-SW (PSP10024)
- 0.520 Bplus-ITW-WM (PSP10129)
- 0.519 Penvy-Col5-PS (PSP10044)
- 0.519 Penvy-1-PS (PSP10045)
- 0.519 Penvy-Col4-PS (PSP10043)
- 0.519 Roatan-Honduras-4-Mush (PSP10079)
- 0.518 Penvy-2-SW (PSP10075)
- 0.511 WFB-UM-WM (PSP10121)
Blockchain Registration Information
- Transaction ID
-
80137a086d9d6cc2
0b28aa44c4102e99 76eab603165c39fa a8529256bafde692 - Stamping Certificate
- Download PDF (39.8 KB)
- SHASUM Hash
-
3f38b9b8659f7e5f
01bd1fa3877ea8fc 64cf0fc8bd895f28 0835d32089c2863a