Blue-Magnolia-Rust
PSP 10086
DNA Source: USA Mycology & More
General Information
- Accession Date
- March 15, 2022
- Report Type
- Whole-Genome Sequencing
Genetic Information
File Downloads
- No. of Contigs (>= 25K bp)
- 445
- No. of Contigs (>= 50K bp)
- 191
- Total Length (>= 25K bp)
- 27,190,316
- Total Length (>= 50K bp)
- 18,030,660
- Total Contigs
- 2,795
- Largest Contig
- 453,946
- Total Length
- 39,135,075
- GC (%)
- 46.17
- N50
- 45,928
Variants
PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
PsiH | c.20C>T | p.Ser7Phe | missense variant | moderate | CM039007.1 | 1667530 | C/T |
PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
PsiD | c.1045G>T | p.Ala349Ser | missense variant | moderate | CM039007.1 | 1676457 | C/A |
PsiD | c.617G>A | p.Gly206Asp | missense variant | moderate | CM039007.1 | 1676885 | C/T |
PsiD | c.616G>A | p.Gly206Ser | missense variant | moderate | CM039007.1 | 1676886 | C/T |
PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
- 0.097 BM2-UM-WM (PSP10126)
- 0.147 BM1-UM-WM (PSP10124)
- 0.184 Mexican Dutch King-1-PS (PSP10070)
- 0.188 Golden-Teacher-ITW-WM (PSP10130)
- 0.188 Blue-Magnolia-Rust-UM-WM (PSP10127)
- 0.200 Thai-1-PS (PSP10053)
- 0.226 Gulf-Coast-BAF (PSP10090)
- 0.226 Gulf-Coast (PSP10091)
- 0.230 GoldenCoast-BAF-B2-UM (PSP10108)
- 0.230 GoldenCoast-BAF-B1-UM (PSP10107)
- 0.232 Golden-Teacher (PSP10089)
- 0.235 Z-strain-3-PS (PSP10084)
- 0.239 BplusONT-WM (PSP10141)
- 0.239 Bplus Denver (PSP10010)
- 0.240 Blue-Meanie-ITW-WM (PSP10128)
- 0.242 Orissa-India-ITW (PSP10071)
- 0.242 Huautla-3-PS (PSP10005)
- 0.242 GoldenTeacher-3-SW (PSP10029)
- 0.242 McKennaii-1-PS (PSP10069)
- 0.243 Ecuador-3-PS (PSP10061)
Most genetically distant strains (All Samples)
- 0.591 Penvy-1-PS (PSP10045)
- 0.591 Penvy-Col5-PS (PSP10044)
- 0.591 Penvy-Col4-PS (PSP10043)
- 0.590 Penvy-2-SW (PSP10075)
- 0.589 Treasure-coast-2-PS (PSP10055)
- 0.588 Treasure-coast-3-PS (PSP10056)
- 0.588 Treasure-coast-1-PS (PSP10054)
- 0.587 Treasure-Coast-2-Mush (PSP10082)
- 0.578 Costa-Rica-2-redo-SW (PSP10023)
- 0.575 Costa-Rica-1-redo-SW (PSP10022)
- 0.557 Costa-Rica-3-redo-SW (PSP10024)
- 0.553 Arenal-Volcano-1-Mush (PSP10059)
- 0.552 ColumbiaRust-1-SW (PSP10021)
- 0.551 WFB-UM-WM (PSP10121)
- 0.551 Luminous-lucies-2-PS (PSP10032)
- 0.550 Luminous-lucies-1-PS (PSP10034)
- 0.550 Luminous-lucies-3-PS (PSP10033)
- 0.546 Roatan-Honduras-4-Mush (PSP10079)
- 0.546 WFB-UM (PSP10112)
- 0.544 Bplus-ITW-WM (PSP10129)
Blockchain Registration Information
- Transaction ID
-
579a173c3f811c69
4cbb7a5d1e6480fe 9cb56c25e39b5818 8b3ee1860e712876 - Stamping Certificate
- Download PDF (40.0 KB)
- SHASUM Hash
-
175ebe12e1bc6af6
e248edd9da06c257 57380fbf12d84919 c1024f4d467b909c